Detailed information on CNT30550221


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641676Ipomoea trilobaNymphaea colorata99.0486.9294.921654reverse complement
CNT30433880Ipomoea trilobaPapaver somniferum94.6794.9595.831581forward

Expression of CNT30550221

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MSPVLLFIVTTSPCQDWVICAPAAFLGCGSRFSGSLSGIEP*

>peptide 2 (44 aa)
MRPFQKSGFVARISSRITTVIRVAGTIKQTITDLMSHSQFHSLN*

>peptide 3 (55 aa)
MMRRRRKGRAIRRVIMNHQSNGLKARVDLLSNKCVPSRSRGLLHVLALELLRLSE*

>peptide 4 (32 aa)
MKYECPRLSLLIITPIPKANVIGPKSYNVIPC*

>peptide 5 (29 aa)
LVEYISVARVRPRTSKGITDLLLPQTSAA*

>peptide 6 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQRNRTEIL*

Sequence

>CNT30550221
GCTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGCGGCTTGAAAGGCCGTA
GTCCCTCTAAGAAGCTGGCCGCGGAGGGATACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCAC
CAACTAAGAACGGCCATGCACCACCACCCATAGAATCTCGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTTCCCGTGTTG
AGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTT
TGATTTCTCATAAGGTGCCGGCGGAGTCCTTAAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTT
CGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTAT
GAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACGTAATAGGACCGAAATCCTATAATGTTATCCCATGCTAATGT
ATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAATTAAGGCCAGGAGCGCATCGCCGGCAG
AAGGGACGAGACGACCGGTGCACACCCTGGGGGCGGACCGGCCGGCCCATCCCAAAGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCT
ATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCGA
TCGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTA
CCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCAATGAGCCCGGTATTGTT
ATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATC
GAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCGCAA
AGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACGGGCTAAAAGCCCGCGTTGACCTTTTATCTAATAAATGCGTCCCTTCCAGAAGTCGG
GGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAGGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCA
CAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGG