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Detailed information on CNT30550219


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 3e-36

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Ipomoea trilobaOryza sativa11.0810097.09481forward
CNT30670969Ipomoea trilobaSetaria viridis23.489.0499.021016reverse complement
CNT30524649Ipomoea trilobaSetaria italica27.5236.2698.741195forward
CNT30641383Ipomoea trilobaNymphaea colorata32.2744.8594.931401forward
CNT30702366Ipomoea trilobaQuercus lobata22.9410099.3996reverse complement
CNT30378673Ipomoea trilobaArabidopsis thaliana16.4457.2698.32714reverse complement
CNT30619000Ipomoea trilobaSesamum indicum45.2364.2996.641964forward
CNT30283003Ipomoea trilobaChenopodium quinoa21.2196.4498.15921reverse complement
CNT30730372Ipomoea trilobaCorchorus capsularis31.8771.5296.461384forward
CNT30632346Ipomoea trilobaVigna unguiculata31.3248.6299.191360forward
CNT30490123Ipomoea trilobaOlea europaea33.7284.0994.191464forward
CNT30505428Ipomoea trilobaNicotiana attenuata65.1192.6997.912827forward
CNT30712870Ipomoea trilobaGlycine max17.0944.6597.84742forward
CNT30157615Ipomoea trilobaPistacia vera10.6963.2296.12464forward
CNT30637481Ipomoea trilobaCapsicum annuum8.6683.9397.07376forward
CNT3092080Ipomoea trilobaSolanum tuberosum7.7657.8100337forward
CNT30185187Ipomoea trilobaSecale cereale32.4739.8697.81410forward
CNT30299053Ipomoea trilobaTriticum aestivum32.4739.3597.521410forward
CNT30221833Ipomoea trilobaHordeum vulgare21.2367.5596.96922forward
CNT30394721Ipomoea trilobaTriticum turgidum32.4738.4997.731410forward
CNT30569654Ipomoea trilobaActinidia chinensis34.0442.2298.171478forward
CNT30543268Ipomoea trilobaBrassica napus21.340.3198.16925forward
CNT30554477Ipomoea trilobaOryza glaberrima8.9153.5397.42387reverse complement
CNT30147396Ipomoea trilobaMedicago truncatula32.2947.1398.721402forward
CNT30438197Ipomoea trilobaAegilops tauschii23.5197.5298.821021forward
CNT30258698Ipomoea trilobaAvena sativa9.5851.4997.84416reverse complement
CNT30660235Ipomoea trilobaTriticum dicoccoides21.6710097.87941reverse complement
CNT30140161Ipomoea trilobaLolium perenne32.4741.4298.161410forward
CNT3017954Ipomoea trilobaZea mays32.6337.497.461417forward
CNT30605068Ipomoea trilobaGossypium raimondii26.3274.898.691143reverse complement
CNT30216563Ipomoea trilobaKalanchoe fedtschenkoi44.850.0193.731945forward
CNT30655407Ipomoea trilobaRosa chinensis63.7582.898.092768forward
CNT30207637Ipomoea trilobaHelianthus annuus31.7670.597.11379forward
CNT30628241Ipomoea trilobaDaucus carota30.4248.9399.71321reverse complement
CNT30682011Ipomoea trilobaTriticum urartu22.4610098.67975forward
CNT30721631Ipomoea trilobaTriticum spelta32.4740.697.661410forward
CNT30346087Ipomoea trilobaEragrostis tef18.7578.7297.67814forward
CNT30359520Ipomoea trilobaLactuca sativa31.7454.1298.191378reverse complement
CNT30429739Ipomoea trilobaPapaver somniferum29.9940.4794.321302forward
CNT30571858Ipomoea trilobaVitis vinifera34.2742.9399.331488reverse complement
CNT3056076Ipomoea trilobaAmborella trichopoda27.575293.321197forward
CNT30108930Ipomoea trilobaOryza longistaminata20.0137.1497.81869forward
CNT3038324Ipomoea trilobaCucumis melo32.7375.3497.541421reverse complement
CNT30499372Ipomoea trilobaDigitaria exilis30.4238.8698.111321forward
CNT30603680Ipomoea trilobaOryza punctata32.4735.7298.091410forward
CNT30557400Ipomoea trilobaPanicum hallii30.4796.4395.391323forward
CNT30113381Ipomoea trilobaFicus carica10.2710095.96446reverse complement

Expression of CNT30550219

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 2 (55 aa)
GDDRQIKGSGGFMIGEREGAWLVWVGGGTRRKGGRPAEFTSEIANMNTNEIFNCV*

>peptide 3 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESCFFKCQ*

>peptide 4 (47 aa)
MNVLPLFGNVEYYLIERPHCGLEASRPSNRILGSILWLVKAWNPFSN*

>peptide 5 (90 aa)
MESAYELVPRKRPLTSGLLGGKLEIYLLLLSFSSRLGWCSVYLSTRSKRMHWMDARALRRKDALRGERPWGDTVCDPWISDRETVSKLRG*

>peptide 6 (30 aa)
MMSMARGRALNGLGWPHFALPTPGKLRIQA*

>peptide 7 (31 aa)
MDFLEFFLSLRCPFIDSRTSDGLHECATSIW*

Sequence

>CNT30550219
GGGGATGACAGACAAATAAAGGGATCAGGGGGCTTTATGATCGGAGAAAGAGAAGGGGCGTGGTTGGTGTGGGTCGGTGGGGGAACCCGTAGGAAGGGGG
GACGACCCGCCGAATTCACATCAGAAATCGCCAACATGAACACAAACGAAATCTTTAATTGCGTATAGAAACAAAGCGAACCACTTCTATTCTCGGAGCT
GAGGTATATGAAGAATGGCTTTTTGGTCCCTTTCGTTCAGTGGTTAGGACATCGTCTTTTCATGTCGAAGACACGGGTTCGATTCCCGTAAGGGATAGGT
ACTCATTCCCGGCCGCTTTCAGTTAGTGTTCATTGCTGAGTGATCGCTCGCTATCTGGCTGGAAAAGATGGTCCGGAAGCTTTCTCTCTCCCAGCAAGCA
AGACGAGATCACCACTTCTCTCAGTAATGGACTTCCTTGAATTCTTCCTTAGCCTTAGATGTCCTTTCATAGATTCTCGAACCTCCGACGGACTCCATGA
ATGTGCTACCTCTATTTGGTAATGTAGAATACTATTTAATTGAAAGGCCCCATTGTGGGCTGGAGGCTTCACGACCGTCTAATAGAATACTTGGAAGTAT
ACTATGGCTAGTCAAGGCTTGGAACCCGTTTTCAAACTGAGCAAGAAAACTCCTGCTTTTTAGAATCTATTTTTTTTTCTGTTTTAAGCTATAGGACTTG
CTTCAACTATTTGAATATATAGTGTGTTCAGTCTAGCTAATGGAAAGTGCCTATGAATTAGTTCCAAGAAAGCGGCCCTTAACCTCAGGGCTTTTAGGAG
GTAAGTTGGAGATCTACTTGCTTTTACTTTCTTTTTCGTCGAGATTGGGTTGGTGTTCAGTGTACCTTAGTACACGATCGAAAAGAATGCATTGGATGGA
TGCCCGGGCATTGAGAAGGAAGGACGCTTTAAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAG
CTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTTAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC
GGCGAGCGAGAGCGGATTGGGGGTTTGAAGAAAAACAAACACGAAGCTTCGTTCCTCAGCAAAGTGTTCACTTCTTTTTCGCCAGGTTTCATTCGATTTG
TTGTGGATTGGATGATGGAAAAACCAGCAAGCTACGGCTTCAAAGCTTACCTTATTCTAAATAAAGGGCTTTTTTATAGATTAAGAGGTTGAGTAAGGGG
GGCGGAGCTTGAAGAGCGAAGCGAGCCGCGCTAGCCTATTACGTTTTTCAGCAGCAAGCTACGGTCTAACGACCCCCTAGCCTAGGTTGGGGCGAAAACT
CAAAAATCCAAAACTAGGAAACCTTTCTAATAAGGTAAGCTTTCAAGCCGCCGCCCTTAACTAGAAGGAGCGGGCGCAGTGAACTGTAATTGTGAAAAGA
TTGGAAGATCTGGCCAAAGAAGGTGATAGCCCTGTAGATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATTCTGATCGCTTTT
ACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCTATTTAGGGA
GTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCTTAGAGCCTTTACTTTATGTAAAGCGCACTCACTCTAACGGCGTACC
TTTTGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAATCTTCTAGTTCTTCCTATTTGACC
CGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGG
CTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAA
TGGGCTAGGGTGGCCCCATTTCGCCTTACCAACCCCAGGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAGACAGACTTTTTGGGTGCTAAGATCCA
AAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTT
GGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTATCAGGGCTCAAGTGATTCACCGAAGCGACGAGA
CCTTGAAAGCTGCTTTTTCAAGTGTCAGTAGCGGAACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTG
ACATGAGTAACGAAAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGTTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAA
CCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACAGAACCATGCCTGTCTGTTGGAGCGAATTGGATGATCGGGCC
GAGGGCTGCCCCCTCTTCCCCTCACTCTCCTTTCCCTAATATGAACCTTGAGTCATCAAAGCCTTTCTGACTCGGCCTGGCCCTACGCGACTGGCGCTTC
AAAAGGCGAAACTCTCGTCGTAGTTTGGCGACCTATCTTCAGTAGGGGCCTTTAGTCTTTTGATTAGAGTAGGGGTCGCGAGAGAGCAGAGCGTACCGCC
CTGCCATAGTCACGAGTCTGTTTATAGTCGCGACTGTTGTCATAGTCAACAAGGTTTAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCC
GGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGT
AACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTG
GTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTTATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTA
ACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTG
AAATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTAACTATAGCTTCGCAGTGACAACCTTGATCGAATGTG
TAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGAGGCG
GGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGCGT
AATGGTATAAGCCTGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAA
CGGATCAAAGGTACGCCGGGGATAACAGGCTGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGG
TTGAAGAAGGTCCCAAGGGTTCGGTTGTTCGCCGATTCAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTACCGTTGGT
GTTAAAGGGAGAACTGCGAGGAGCCAACCCTAGTACGAGAGGACTGGGTTGGGCCAACCTATGGTGTACCGGTTGTTATGCCAATAGCAGCGCCGGGCAG
CTAAGTTGGTATGGAAGAACTGCTGCGCCGCGGGAAATCCTTCTCTATACAAGTTCTCGGACGAGGTTTTTGAACAGAACTTCGATAGGCGAGAGGTGTA
AGCACCGCGAGGTGTGAAGCGATCTCGTACTAAACGAAACGACTTTCACTTTCTCCATAACAAAAATGAAAGAAAGTAAACCTATTCCTGCAATTGCGGT
CAGTCTCGCTACCTCTTTAGTTTAGTTGCCGCCGTCACAAAA