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Detailed information on CNT30550163


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639835Ipomoea trilobaNymphaea colorata82.4349.7995.081666reverse complement
CNT30318007Ipomoea trilobaCorylus avellana74.374397.541503reverse complement
CNT30619309Ipomoea trilobaSesamum indicum69.6764.0996.161408reverse complement
CNT30730504Ipomoea trilobaCorchorus capsularis58.68100.0896.631186forward
CNT30526827Ipomoea trilobaPhaseolus vulgaris62.7999.8495.981269reverse complement
CNT30711135Ipomoea trilobaGlycine max70.9145.1196.021433forward
CNT30542906Ipomoea trilobaBrassica napus81.9997.5995.531657forward
CNT30265711Ipomoea trilobaBrassica rapa73.3857.8895.141483forward
CNT30583181Ipomoea trilobaEchinochloa crusgalli82.3470.9994.891664forward

Expression of CNT30550163

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 2 (54 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGA*

>peptide 3 (87 aa)
MEQCRQGKSAKWIRNFGKRIGSEGWARGSQSRTRRLFGGLLELLPRRERVAACRPGDGLGTAPSGAFPGRRTANSELVRTRGIRLFN*

>peptide 4 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 5 (55 aa)
STATSRFRNFNPIPFRRTRETRCLSGFPRPLGSTNPCASAVHMEPFPSSAFKVLI*

>peptide 6 (30 aa)
QPPRPGSGILTRFPFGARAKRAVCRASPDP*

Sequence

>CNT30550163
GTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGGCGCACGCGCGAAACGCGCTGTCTGTCGGGCTTCCCCCGACCCTTAGGATCG
ACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCG
ACGGCCGCTCCGCCCGGGCTCGCGCCCAAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTAGCTCTTGCCCCGATGAGTAGGAGGGCGC
GGCGGTCGCTGCAAAACCTTGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCG
AAAATGGATGGCGCTTAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGAGCTAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGG
GCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGT
GAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGTCGGGGGAAGCCCGACAGACAGCGCGTTTCGCGCGTGCGCCGAAAGGGAATCGGGTTAAAATT
CCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCA
CCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGA
GGACCGAGTGCCGTCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGCCAATGGAACAATGTAGGCAAGGGAAGTCGG
CAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTTCGGCGGACTGCTCGAGCT
GCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCCTTCGGGGGCCTTCCCCGGGCGTCGAACAGCCAACTCAGAA
CTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAA
TGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGC
ATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCT
GTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTA
TTTTACTTATTCCGTGAATCGGAGGCGGGGCATTGCCCCTCTTTTTGGACCCAAGGCTCGCTCGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGG
AGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAGAAGGGTAAAAGCT
CGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTTA
CCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCAC
CAAGTGTTGGATTGTTCACCC