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Detailed information on CNT3054999


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222508Amborella trichopodaHordeum vulgare12.5624.8386.4974forward

Expression of CNT3054999

Peptides detected in this lncRNA

>peptide 1 (52 aa)
NMREQVILEQNKLITPQVQVNNTSSATSLVENTPSDMPSKSLFALLSLNQNQ*

>peptide 2 (42 aa)
MHPPRQGRLPCMSQVSPPSLPCTVPKTPFVLQECSPLSRPRS*

Sequence

>CNT3054999
CAAACATGAGAGAACAGGTGATACTAGAACAAAATAAGTTAATAACACCTCAAGTGCAAGTTAATAACACCTCAAGTGCTACTTCTTTGGTGGAGAACAC
GCCATCAGACATGCCCTCAAAAAGTTTATTTGCACTCCTCTCCCTAAACCAAAACCAGTAACATGACAAAATCCTAAAAAAAAGAGGAAAAACCCTCTCA
AAAGCAGCAAACCAAACCAGCCGAACCAAAGGACAGAGACAACAAACAGACACTCAGTAATGTCCAAAAAAAGAAGAAGATGAGAGAGGGACTCAGGGGA
CAGAGAGAGAACATATACTCTCTAATACTTGTAATCCTTGACATGAAGACTCTCTGATGCACCCTCCCCGACAGGGGCGTCTCCCTTGTATGTCCCAAGT
GTCGCCTCCGAGTTTGCCTTGCACCGTGCCAAAAACGCCTTTTGTGCTGCAGGAATGTTCTCCTCTTTCCCGGCCCAGGTCTTGAGTGTACAGTGCGCTG
GAGGGCGCGGATGGTGTGCTCAGCAATGACCTCAGGGGCAACCTTGGGAGCATCGGAACCAGGGGTGACCATGTTGGGCTTCAGGAGGG