Detailed information on CNT30549672


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371492Ipomoea trilobaOryza glumipatula25.1713.5986.373reverse complement

Expression of CNT30549672

Peptides detected in this lncRNA

>peptide 1 (47 aa)
VKSVKSIEDLVEELISYSAIQDRKQPIVYILAAEFSNITLQHTADAR*

Sequence

>CNT30549672
GTAAAATCTGTCAAATCAATTGAAGATTTAGTAGAAGAGTTGATCTCATATAGTGCAATTCAGGATAGAAAACAGCCCATAGTTTACATACTTGCAGCAG
AATTTTCAAACATCACATTACAGCACACAGCAGATGCCAGATAGAGTTCAAAACAGTTGATTAACAACTTCAAAAGCATTCTATAATGCCTGGATTTGCG
TGAATCAGGAAGCTATTATTCATTCATAACAGGCTTGTTTTCATTCGCTTTAGGCTTCTGTTCCTTTGGCTTTTGCTCTTCAGTTTTCCT