Detailed information on CNT30549269


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30403782Ipomoea trilobaBeta vulgaris45.5458.6179.59245forward
CNT30708216Ipomoea trilobaGlycine max65.6163.1579.89353forward
CNT30234716Ipomoea trilobaBrassica oleracea47.5894.4683.59256forward
CNT30468644Ipomoea trilobaSaccharum spontaneum38.8522.2181.34209forward
CNT3017147Ipomoea trilobaZea mays28.8121.6884.52155forward
CNT30625547Ipomoea trilobaDaucus carota53.5327.7581.6288forward
CNT30366570Ipomoea trilobaSorghum bicolor45.5440.0380.41245forward
CNT3035160Ipomoea trilobaCucumis melo39.9642.6682.33215forward
CNT30103220Ipomoea trilobaOryza rufipogon42.7524.7681.74230forward

Expression of CNT30549269

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MGMLGCSSVMWDCTQERWDCTLVMWDCRMVMLDYMKVTLGYMMVRLDCKMERWGCRTVRLGCMQERLGCN*

Sequence

>CNT30549269
CTGTAACTTGGGGAAGAAGGGCTGTAAGGACTAGAAGGAGACAGCTTGGGACTGGTGGGCGAGTACGCAATTGAGGGACTGTATCTCGCTGAAGGATTGT
AGCTTGGTGAGGTGGGACTATAAGATGGGGATGTTGGGCTGTAGCTCGGTGATGTGGGACTGTACCCAGGAGAGGTGGGACTGTACGCTGGTGATGTGGG
ACTGTAGGATGGTGATGTTGGACTATATGAAGGTGACGTTGGGCTATATGATGGTGAGGTTGGACTGTAAGATGGAGAGGTGGGGCTGTAGGACGGTGAG
GTTGGGCTGTATGCAGGAGAGGTTGGGCTGTAACTAGGAGATGTAGGGCTGTAACTTGGTGACGTAGGGCTGTAGCTTGGAGAAGTCGGTGAATATGACG
GACTGGTTGGAGAATATGCAGGACTAGTGGGGCTGTAACCAGGGGAACTAGGACTATAGGTGGGTGAAGTGGGGCTGTATCCTGGGGAAGTGGGGCTGTA
CCCCGGGGATGTGGGGCTGTATCCTGGGGACGTGGGGC