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Detailed information on CNT30549224

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30376525	Ipomoea triloba	Arabidopsis thaliana	67.54	54.12	79.71	414	forward
CNT30378908	Ipomoea triloba	Manihot esculenta	57.59	37.39	80.17	353	forward

Expression of CNT30549224

Peptides detected in this lncRNA

>peptide 1 (69 aa)
VMWDCTQERWDCTLVMWDCRMVMLDYMKVTLGYMMVRLDCKMERWGCRTVRLGCKMEMLGYRQERLGCN*

>peptide 2 (33 aa)
MMVGGSTDWRTSRCHAKFKTTVHVTRQWDFYSLF

Sequence

>CNT30549224
CGGTGATGTGGGACTGTACCCAGGAGAGGTGGGACTGTACGCTGGTGATGTGGGACTGTAGGATGGTGATGTTGGACTATATGAAGGTGACGTTGGGCTA
TATGATGGTGAGGTTGGACTGTAAGATGGAGAGGTGGGGCTGTAGGACGGTGAGGTTGGGCTGTAAGATGGAGATGTTGGGCTATAGGCAGGAGAGGTTG
GGCTGTAACTAGGAGATGTAGGGCTGTAACTTGGTGACGTAGGGCTGTAGCTTGGAGAAGTCGGTGAATATGACGGACTGGTTGGAGAATATGCAGGACT
AGTGGGGCTGTAACCAGGGGAACTAGGACTATAGGTGGGTGAAGTGGGGCTGTATCCTGGGGAAATGGACTGTATCCAGGCGATGATGGACTATATCCAG
GGGATGAAGTAGGTGAGAAAGCCATTCCCGTAACATAAGGAGAAAACTGAGCATCCGTAGAGGGCGACATCCGGAGATTAGGGCTCAGCATTGGAGACAT
AAGACCATCATGATGGTAGGGGGTTCCACTGATTGGAGAACGAGCAGGTGTCATGCCAAATTCAAGACCACTGTCCATGTAACTAGGCAGTGGGATTTCT
ATAGCTTGTTTCA