Detailed information on CNT30549216


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30536042Ipomoea trilobaEucalyptus grandis40.4241.8284.35230forward
CNT30315993Ipomoea trilobaCorylus avellana63.2735.8980360forward
CNT30591949Ipomoea trilobaMusa acuminata45.8753.780.84261forward
CNT30596739Ipomoea trilobaOryza meridionalis52.0245.5482.09296forward
CNT30330871Ipomoea trilobaDioscorea rotundata89.4670.479.76509forward
CNT30577473Ipomoea trilobaOryza barthii52.0254.3181.42296forward

Expression of CNT30549216

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MGMLGCSSVMWDCTQERWDCTLVMWDCRMVMLDYMKVTLGYMMVRLGCKMEMLGYRQERLGCN*

Sequence

>CNT30549216
CTGTAACTTGGGGAAGAAGGGCTGTAAGGACTAGAAGGAGACAGCTTGGGACTGGTGGGCGAGTACGCAATTGAGGGACTGTATCTCGCTGAAGGATTGT
AGCTTGGTGAGGTGGGACTATAAGATGGGGATGTTGGGCTGTAGCTCGGTGATGTGGGACTGTACCCAGGAGAGGTGGGACTGTACGCTGGTGATGTGGG
ACTGTAGGATGGTGATGTTGGACTATATGAAGGTGACGTTGGGCTATATGATGGTGAGGTTGGGCTGTAAGATGGAGATGTTGGGCTATAGGCAGGAGAG
GTTGGGCTGTAACTAGGAGATGTAGGGCTGTAACTTGGTGACGTAGGGCTGTAGCTTGGAGAAGTCGGTGAATATGACGGACTGGTTGGAGAATATGCAG
GACTAGTGGGGCTGTAACCAGGGGAACTAGGACTATAGGTGGGTGAAGTGGGGCTGTATCCTGGGGAAGTGGGGCTGTACCCCGGGGATGTGGGGCTGTA
TCCTGGGGACGTGGGGCTGTATCCAGGTGAAGATGGACTGTATCCAGGCGATGATGGACTATATCCAGG