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Detailed information on CNT30549212


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT001646, E-value = 7e-93

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678637Ipomoea trilobaSetaria viridis12.7394.5894.53384reverse complement
CNT30524663Ipomoea trilobaSetaria italica19.2910088.83582forward
CNT30641615Ipomoea trilobaNymphaea colorata15.0581.9595.37454forward
CNT30513456Ipomoea trilobaJuglans regia25.1623.9198.02759forward
CNT30270599Ipomoea trilobaChenopodium quinoa29.5754.7995.52892forward
CNT30730494Ipomoea trilobaCorchorus capsularis28.4197.3998.02857forward
CNT30630109Ipomoea trilobaVigna unguiculata29.5728.396.86892forward
CNT30196906Ipomoea trilobaPisum sativum1143.8697.89332forward
CNT30632746Ipomoea trilobaCapsicum annuum6.6327.6696.5200reverse complement
CNT3090649Ipomoea trilobaSolanum tuberosum18.6620.5999.11563forward
CNT30294119Ipomoea trilobaTriticum aestivum9.08100.3795.26274reverse complement
CNT30220355Ipomoea trilobaHordeum vulgare9.4194.9896.13284forward
CNT30396824Ipomoea trilobaTriticum turgidum25.5276.4691.56770reverse complement
CNT30569398Ipomoea trilobaActinidia chinensis22.3134.4497.77673forward
CNT30511593Ipomoea trilobaSolanum lycopersicum6.228.7394.12187forward
CNT30552690Ipomoea trilobaOryza glaberrima32.2863.6291.68974forward
CNT30442196Ipomoea trilobaAegilops tauschii27.5197.8893.01830reverse complement
CNT30657980Ipomoea trilobaTriticum dicoccoides13.3298.5394.53402reverse complement
CNT30460233Ipomoea trilobaSaccharum spontaneum24.9324.3895.48752forward
CNT303548Ipomoea trilobaZea mays31.2666.2292.36943reverse complement
CNT30205642Ipomoea trilobaHelianthus annuus30.0387.5497.9906forward
CNT30627951Ipomoea trilobaDaucus carota10.6741.6682.92322forward
CNT30688674Ipomoea trilobaTriticum urartu27.9764.0992.54844forward
CNT30720843Ipomoea trilobaTriticum spelta6.7694.8883.82204forward
CNT30347837Ipomoea trilobaEragrostis tef21.4583.9290.42647reverse complement
CNT30363261Ipomoea trilobaSorghum bicolor14.5234.4188.81438forward
CNT30620564Ipomoea trilobaCajanus cajan35.6320.7795.721075reverse complement
CNT30354697Ipomoea trilobaLactuca sativa11.5349.2999.71348forward
CNT30410483Ipomoea trilobaPapaver somniferum32.4547.8597.96979forward
CNT30642274Ipomoea trilobaCannabis sativa27.0599.8893.01816reverse complement
CNT30319706Ipomoea trilobaAsparagus officinalis24.5325.7597.97740forward
CNT3036965Ipomoea trilobaCucumis melo23.9699.3197.93723forward
CNT30331560Ipomoea trilobaDioscorea rotundata10.8164.5591.72326reverse complement
CNT30150154Ipomoea trilobaBrachypodium distachyon29.9378.9391.36903forward
CNT30104374Ipomoea trilobaOryza rufipogon32.2873.3491.48974reverse complement
CNT30576813Ipomoea trilobaOryza barthii6.5326.7395.94197forward
CNT30581628Ipomoea trilobaEchinochloa crusgalli3.7533.0494.69113forward
CNT30497700Ipomoea trilobaDigitaria exilis14.6880.9988.26443reverse complement
CNT30604015Ipomoea trilobaOryza punctata16.74104.5591.49505reverse complement
CNT30174498Ipomoea trilobaVigna angularis13.2979.4195.01401forward
CNT30551087Ipomoea trilobaOryza brachyantha9.98101.0187.71301reverse complement
CNT30115272Ipomoea trilobaEutrema salsugineum8.6253.591.15260forward

Expression of CNT30549212

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MSALLFRLPQSSGSTAETATGSLPLRGWSDRSFF*

>peptide 2 (32 aa)
MKTNNQAKKFSIPLLRVKWWDPCLIFFNIILP*

>peptide 3 (30 aa)
VIQVSTVRTRWMLVVPTILSIPSPIRKGVI*

>peptide 4 (31 aa)
MERQKFFLRIQEKVTARRAVYHYDRCQVEVQ*

>peptide 5 (39 aa)
YTGIHSTNEMDACCPNHSFNPEPDKEGGNLEQSFRVVYS*

>peptide 6 (38 aa)
MVLYSITYMDRVKKPDPVSLGILNMPIIVLIHICLSPIN

>peptide 7 (45 aa)
MCSRETYGTLFHYIHGSGQKTRPSLSWNPEYANNCTNPHMSLSHQS

>peptide 8 (42 aa)
MLFTENVRHPTLSLSIATGFFFLSSAPETRSFVKNSQSSQAQ*

>peptide 9 (71 aa)
MFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWCTSSRAHGKRWVAKCGADNC*

>peptide 10 (47 aa)
MEFSEISFVSYKKRIPFVYVLPRNIWYSIPLHTWIGSKNQTQSLLES*

>peptide 11 (75 aa)
MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMIRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSSTPG*

>peptide 12 (36 aa)
MVLDIPDAHVQFMKLRTSQLRPPPIEISYLGISCAA*

>peptide 13 (32 aa)
MLLIGTNTIGFTRNTEPLGVTFRSILESINET*

Sequence

>CNT30549212
GTTATACAGGTATCCACAGTACGAACGAGATGGATGCTTGTTGTCCCAACCATTCTTTCAATCCCGAGCCCGATAAGGAAGGGGGTAATTTAGAACAAAG
TTTTCGTGTTGTTTATTCCTAGGTGTAGTGATTATTCCCCTATGCTGCTTATTGGCACTAATACAATAGGATTTACCCGTAATACAGAACCTCTAGGTGT
AACCTTCCGCTCAATACTAGAATCGATAAATGAAACATAACATTTGAGGTTGCATTAATCGAGGATACACGACAGAAGGAATTGTTCTATTTCCAAACTT
CACCTTCAACTTGAAAATTGGATTTTTTTTCAATAATTTGGCGTGTCTTTCTCGTAAGACTGAGAGAAATGACTAAATATTAAATAAAATATTCTAAAGT
AAACTAAGAATCAAATCGCACCATCTCTGTAATAGGTAAATGCCTCTTTTTCTCCTGAAGTTGTCGGAATTATTCGTAATAAGCTAAAGATTATAAAAAA
CAAAACAAGCAACGGCTTTCGCGTCAGCCCTTGCTTGTTTCCAGCCGTTGCTTGTTGGTTGGTGCTAATCTAAGGTAGCTGCAGAAGAAAGAAAAGAAGA
CGGTAAAAGTACATCGGCATCAATGCTGCTGCCCAGCTTCTCCTCGATCCGGGCCTTGCGTGTTTGTTTTGCATAATTGAATAATCTTTTTTTTATCTTT
CATCCACTCTTCAATCTTAGGGCTTCCGTAGCAGGTCAAATGTTGAGTGAATTAGAAAGGATTCCAAGAGTTTGACCTCGCGGGAAAATCCGAACTCGCT
CGTTTCCAATCCGGTTGAAAGGACGAAAGGAGGTTAGGAAAGGAGATGAGTCTTTCTTTATTATGAAAACACATAACTGAAAGGCCTTGATCTAACGGAC
TCTGTACCACAGATACATGTTATTCACTGAAAATGTAAGGCACCCAACACTCTCTCTTTCTATTGCGACAGGATTCTTCTTTCTTTCATCTGCGCCTGAG
ACCAGGAGCTTCGTCAAGAACAGTCAAAGCAGTCAAGCCCAGTAGGCACTAAGAAGAGCGGCTACTTCAGAGTCGATAGCAGTAGCAGCGGAGAAGATCC
CAACAACGGCTATTTTAACACCGCTTACTGTACCAGCGGTTTCTTTTTGGCCTCTTCCTCTTCTACTATTCTACTTGCCGGAAATCTGGACATGAAAAAG
AAATGGTTCTCGATATACCAGACGCTCATGTGCAGTTTATGAAATTGAGAACATCACAGCTGAGACCTCCCCCTATTGAAATCTCGTATTTGGGCATTTC
CTGCGCAGCTTAGGTGGAAGGCGAAGAAGGCCTCCTTCCGGGGGGCCCGAGCCATCAGTGAGATACCACTCTGGAAGGGCTAGAATTCTAACCTTGTGCC
AGGACCTACGGGCCAAGGGACAGTTTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCGGA
CGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCG
AGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGTATAACAGGCTGATCTTCCCCAAGAGCTCACATCGACGGGAAGGTTTGGCACCTCGATG
TCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTT
CGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAGTTCTCGTGCCC
ACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGAAAGCATCTAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCCTATTCCGACTTCCC
CAGAGCTCCGGTAGCACAGCCGAGACAGCGACGGGTTCTCTGCCCCTGCGGGGATGGAGCGACAGAAGTTTTTTTTGAGAATTCAAGAGAAGGTCACGGC
GAGACGAGCCGTTTATCATTACGATAGGTGTCAAGTGGAAGTGCAGTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTTAACCTTGTTCCT
ACATGACCTGATCAATTCGATCAGGCACTCGCCATCTATTTTCATTGTTAAACTCTTTGACAACATAAAAAACCAAAAGCTCTGCCCTCCCTCTCTATCT
ATCCAAGGGATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCACTAGCCAATATGCTTTTCTCTCATGCCTTTCTT
CGTTCATGATTCGATATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGG
GGAGGTCCTGCGGAAAAATAGCTCGACGCCAGGATGATAAAAAGCTTAAGACCTCTCATTCTTATTACTTTTTCAATATGAAAACGAATAATCAAGCTAA
AAAATTTAGCATTCCCTTGCTTAGGGTGAAATGGTGGGATCCTTGTTTGATTTTTTTTAATATCATCCTTCCTTAGTACTGGGACGCGCATATATCAAAA
GCTCAGTGTGCAATTTGAATGAGATAGATTTTTTATTTAAAATTCCAAATGAGTAATTGAGGTTACACAAAATCGGAGCCAAAAAAGGAAAAAGTTTAAT
CTGGAAAAGTCTTCTATCAGGGTAATGGAATTTAGTGAAATTTCTTTTGTATCGTACAAGAAACGAATTCCATTTGTGTATGTGCTCCCGAGAAACATAT
GGTACTCTATTCCATTACATACATGGATCGGGTCAAAAAACCAGACCCAGTCTCTCTTGGAATCCTGAATATGCCAATAATTGTACTAATCCACATATGT
CTCTCTCCCATCAATCG