Detailed information on CNT30549200


BLAST search results

BLAST vs Swiss-Prot:
sp|O65660|PLAT1_ARATH, E-value = 9e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30441862Ipomoea trilobaAegilops tauschii33.4511.2987.8899forward

Expression of CNT30549200

Peptides detected in this lncRNA

>peptide 1 (73 aa)
YLGRNLLTVAGGEPGANGVTVIHDSSERVRRRVGGEPLLDGEELLTAGLMDAGDGDLDVVTVPAVIFAGSIGG*

Sequence

>CNT30549200
TTATTTGGGAAGAAATCTTCTCACCGTCGCCGGCGGCGAGCCGGGAGCGAACGGAGTAACAGTTATCCACGATAGCAGTGAGCGTGTACGGCGACGTGTC
GGTGGCGAGCCACTGCTCGACGGTGAAGAGCTGCTGACTGCAGGCCTGATGGACGCCGGTGACGGTGACCTCGACGTAGTTACAGTACCAGCCGTGATTT
TTGCCGGATCCATCGGAGGTTAGGTTCATGTCGTTGATCCGTACGCCGTAACCGTCGGAGTCGTAGAGAGTCAAGGTGATGATCGAGTCCGTTCCG