Detailed information on CNT30549182


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628449Ipomoea trilobaVigna unguiculata20.2710.9788.5261forward
CNT30296213Ipomoea trilobaTriticum aestivum23.5925.6390.1471forward
CNT30391155Ipomoea trilobaTriticum turgidum23.5910.2391.5571forward
CNT30261973Ipomoea trilobaBrassica rapa20.2710.6590.1661forward
CNT30458448Ipomoea trilobaSaccharum spontaneum25.5811.6787.0177forward
CNT30137282Ipomoea trilobaLolium perenne23.5916.5587.3271forward
CNT30683585Ipomoea trilobaTriticum urartu23.5911.1891.5571forward
CNT30351207Ipomoea trilobaEragrostis tef23.5910.8987.3271forward

Expression of CNT30549182

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLLSLIHVRSRPSVLEVALAVFLRVPAHANRGPSVG

Sequence

>CNT30549182
GACTAAAATAACCCTTATTAGTAAAAGAAGAATCTATATTGTCATTGTGTGACACCACCATTGCCACATTAAATCAGAGCCATGCTAGCAGAAGAAAACA
CAAGCACAATCCATAAAACAAAAAGACATCATTCGACAACCCCAATGAAAACAAGCAATTAAGAAAAAAGGGCCTTTTGTAAAACACAACAAATGCTTTT
GTCTTTGATCCATGTTCGAAGCCGGCCTTCTGTCCTCGAAGTAGCCCTTGCCGTCTTTCTCCGTGTCCCGGCCCACGCGAACCGAGGCCCCTCGGTCGGC
C