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Detailed information on CNT30549101

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 4e-38

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30316118	Ipomoea triloba	Corylus avellana	59.49	49.16	79.77	351	forward
CNT30376704	Ipomoea triloba	Arabidopsis thaliana	44.07	32.99	81.54	260	forward
CNT30616515	Ipomoea triloba	Sesamum indicum	31.86	27.89	85.11	188	forward
CNT30727661	Ipomoea triloba	Corchorus capsularis	65.42	61.66	80.31	386	forward
CNT30524932	Ipomoea triloba	Phaseolus vulgaris	31.36	39.45	82.7	185	forward
CNT30628702	Ipomoea triloba	Vigna unguiculata	66.44	57.23	78.57	392	forward
CNT30489068	Ipomoea triloba	Olea europaea	72.54	86.64	81.07	428	forward
CNT30591858	Ipomoea triloba	Musa acuminata	47.8	55.62	80.85	282	forward
CNT3087924	Ipomoea triloba	Vigna radiata	33.9	65.79	82	200	forward
CNT30256655	Ipomoea triloba	Avena sativa	31.36	41.2	82.7	185	forward
CNT3062262	Ipomoea triloba	Arabidopsis lyrata	44.07	47.45	82.31	260	forward
CNT3076593	Ipomoea triloba	Brassica juncea	32.37	34.98	83.25	191	forward
CNT30141877	Ipomoea triloba	Lolium perenne	31.36	41.29	83.78	185	forward
CNT30216750	Ipomoea triloba	Kalanchoe fedtschenkoi	42.03	50.61	81.85	248	forward
CNT30205103	Ipomoea triloba	Helianthus annuus	46.1	38.42	81.25	272	forward
CNT30350937	Ipomoea triloba	Eragrostis tef	48.31	51.54	81.75	285	forward
CNT30476941	Ipomoea triloba	Arabidopsis halleri	48.64	35.83	82.58	287	forward
CNT30620207	Ipomoea triloba	Cajanus cajan	30.34	8.33	82.12	179	forward
CNT30354661	Ipomoea triloba	Lactuca sativa	46.27	49.1	81.68	273	forward
CNT3028162	Ipomoea triloba	Theobroma cacao	37.46	39.39	81.45	221	forward
CNT3051605	Ipomoea triloba	Amborella trichopoda	27.8	24.74	83.54	164	forward
CNT3035221	Ipomoea triloba	Cucumis melo	29.32	45.29	84.97	173	forward
CNT30330867	Ipomoea triloba	Dioscorea rotundata	87.8	71.65	79.15	518	forward
CNT30150463	Ipomoea triloba	Brachypodium distachyon	41.02	27.53	80.99	242	forward
CNT30584421	Ipomoea triloba	Echinochloa crusgalli	32.37	23.7	83.25	191	forward
CNT30498009	Ipomoea triloba	Digitaria exilis	40.51	24.41	82.01	239	forward
CNT30558075	Ipomoea triloba	Panicum hallii	31.86	23.83	82.45	188	forward
CNT30551544	Ipomoea triloba	Oryza brachyantha	50.17	42.59	81.42	296	forward
CNT30114394	Ipomoea triloba	Ficus carica	26.78	26.55	84.18	158	forward

Expression of CNT30549101

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MGMLGCSSVMWDCTQERWDCTLVMWDCRMVMLDYMKVTLGYMMVRLGCKMEMLGYRQERLGCMQERLGCN*

Sequence

>CNT30549101
CTGTAACTTGGGGAAGAAGGGCTGTAAGGACTAGAAGGAGACAGCTTGGGACTGGTGGGCGAGTACGCAATTGAGGGACTGTATCTCGCTGAAGGATTGT
AGCTTGGTGAGGTGGGACTATAAGATGGGGATGTTGGGCTGTAGCTCGGTGATGTGGGACTGTACCCAGGAGAGGTGGGACTGTACGCTGGTGATGTGGG
ACTGTAGGATGGTGATGTTGGACTATATGAAGGTGACGTTGGGCTATATGATGGTGAGGTTGGGCTGTAAGATGGAGATGTTGGGCTATAGGCAGGAGAG
GTTGGGCTGTATGCAGGAGAGGTTGGGCTGTAACTAGGAGATGTAGGGCTGTAACTTGGTGACGTAGGGCTGTAGCTTGGAGAAGTCGGTGAATATGACG
GACTGGTTGGAGAATATGCAGGACTAGTGGGGCTGTAACCAGGGGAACTAGGACTATAGGTGGGTGAAGTGGGGCTGTATCCTGGGGAAGTGGGGCTGTA
CCCCGGGGATGTGGGGCTGTATCCTGGGGACGTGGGGCTGTATCCAGGTGAAGATGGACTGTATCCAGGCGATGATGGACTATATCCAGG