Detailed information on CNT30549034


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3037914Ipomoea trilobaCucumis melo24.7819.4589.13414reverse complement

Expression of CNT30549034

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSHELVSRAFRQFLATFTFNPIHRLRALYAQSF

>peptide 2 (66 aa)
MLHRLCRPPSIPLSFGLATVLPRRSVSRVSWAPDPRRPRANTHRLRHGLPGYLILFAPHAFAPQRR*

>peptide 3 (49 aa)
LVRCFGRNQFPGCDGRCVQGPGTYSPRHADPRLLAIPTSCSRVAENNPN*

>peptide 4 (41 aa)
MLSHLSVGRDPESCLRFWRSFVDLRISPLTHEIPLSSVSLK*

>peptide 5 (30 aa)
MNWFREHSASFWRLSLSTRFTAYVPFTPSHS

>peptide 6 (32 aa)
MPSLSLPSTRRRRHLQDKAKNLTLLNKKQSSK*

Sequence

>CNT30549034
TTAGTCCGATGCTTCGGGCGAAACCAATTCCCAGGGTGTGACGGGCGGTGTGTACAGGGCCCGGGTACATATTCACCGCGGCATGCTGATCCGCGATTAC
TAGCGATTCCAACTTCATGTTCCCGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCAGATTCGCTCCGCCTTACAGCCTTGCTTCCCATTGTAA
TTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCACTGGCAGTCCTTAGTGAGT
GCGGCACGCACCTTTTTGTTTGTTTCGGAGCCGTTTTGGCGGGGCGTACTAAACCCACTACGTACCACACCACCGGGCGGCTCGCCTGAATGCCGAGTCT
TTCTCTGCCGTCAACTCGACGTCGTCGTCACCTGCAAGATAAGGCCAAAAACTTGACTTTACTAAACAAGAAACAAAGCAGTAAATGAAGCCCTTTCTTT
AGTCAAGCGCGCTAGCTGCAATCAAACTAAAGCGCTAACTAGAAAGTGCTTCGAAAGGCGCCGGCTACCTTCTTACTGACAGCACAGCTAGGTGCTGGCA
CTCAATTAGTAGCGCTGGCACGTCACTCGGCTCCTCGGCTCACTTCGGTTGCAAAGACTTTCTCCTTAGGCGCCGGCTACCTTCTTACTGACAGCACAGC
TAGGTGCTGGCACTCAATTAGTAGCGCTGGCACGTCACTCGGCTCCTCGGCTCACTTCGGTTGCAAAGACTTTCTCCTTAGGCGCATGTCTCAGCAACAC
AAAACGAGGGTTTCGCTCGTTATAGGACTTGACCAAACATCTCACGACACGAGCTGACGACAGCCATGCAGCACCTGTATGAAAGTAAGTACCATCCCGT
TAAGGACAGGTTTTCTTGTTCATATGTCAAGGGCTGGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACCGCTTGTGCAGGCCCCCGTCA
ATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGGAGTGTTTCACGCGTTAGCTGGGCCCCTGATCCGCGTAGACCAAGGGCGAACACTCATC
GTTTACGGCATGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCATGCTTTCGCACCTCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGC
GTTCCTTCGTGGATCTCAGGATTTCACCCCTAACACACGAAATTCCACTCTCCTCTGTCTCACTCAAGTGAATTGGTTTCGAGAGCATTCCGCCAGTTTT
TGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGC
ACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCACTGCCCTTCTTCACTCACGCGATATT
GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCATGAATTGGTTTCGAGAGCATT
CCGCCAGTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCC