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Detailed information on CNT30548750


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000334, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30719706Ipomoea trilobaMalus domestica golden81.1494.6594.991097forward

Expression of CNT30548750

Peptides detected in this lncRNA

>peptide 1 (53 aa)
RHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 2 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

Sequence

>CNT30548750
CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGA
ATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGAAAGGCGAAAGTGA
AATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGCATTGCCCCTCTTTTTGGACCCAAGGCTCGCTCGCGGGCCGATCCGGG
CGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACACAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGT
GTGGAACAGAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAG
CTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTA
TCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTA
CTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAG
CTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGACCGACGCATGCGCTCGCCATCCGTTTGCCGACCCGCAGTAGGGGCCA
TTTGGCCCCCAAGGGCACGTGTCGTTGGCTAAGCCGTCGTGGCAGAAGGGTCGCGGCGGCCGCCTTGAATTACAATTCCGATCGAGCGGTGAGCTGAATC
CTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGGGGTAGAGTGGCCTTGCTGCCACGATCCTCTGAGATTCAGCCCTTTGTCGCTTCGATTCGT
CCCTCCCCCCATCACTTAGTCCCTCGCTCCCTATCTACCCATTTAAAATCCCCAATATGCCGTGAGAGGTTGAACACGAACTTGTCATGGTAAAGTGTCT
AAGTATCTAAGTGGATGCGCACAAGAAATGCCTATTAAGATTGTAAGTGTCTAAGTACTTACAAAATTTCAGTTAAGTGTATAAGTGTTTAAGTGTCCAA
GGACTTGGCCGAGAAATGCCGCAACATGGTGCGGACTTGGCCGAGACATGCC