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Detailed information on CNT30548694


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020362Ipomoea trilobaCitrullus lanatus42.374.7486.67150reverse complement
CNT30415137Ipomoea trilobaPapaver somniferum25.997.191.392forward

Expression of CNT30548694

Peptides detected in this lncRNA

>peptide 1 (29 aa)
NSTPGSPGSTTAGPNHTQKKSLILAQKER*

>peptide 2 (31 aa)
MQVERCFRGAGHKEKRLLAKGSLSRPGGEKS*

Sequence

>CNT30548694
GAAATAGTACGCCCGGTTCACCAGGTTCTACCACTGCAGGGCCCAATCATACTCAAAAGAAGAGTTTGATCCTGGCTCAGAAGGAACGCTAGCTATATGC
TTAACACATGCAAGTCGAACGTTGTTTTCGGGGAGCTGGGCATAAGGAAAAGAGGCTCCTAGCTAAAGGTAGCTTGTCTCGCCCAGGAGGTGAGAAGAGT
TGAGAACAAAGTGGCGAACGGGTGCGTAACGCGTGGGAATCTGCCGAACAGTTCGGGCCAAATCCTGAAGAAAGCTAAAAAGCGCTGTTTGATGAGCCTG
CGTAGTATTAGGTAGCTTGTCTCGCCCAGGAGGTGAGAACAAAGTGGCGAACGG