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Detailed information on CNT30548225


BLAST search results

BLAST vs Swiss-Prot:
sp|P42792|CYB_ARATH, E-value = 2e-175

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378677Ipomoea trilobaArabidopsis thaliana63.528.5895.4783forward
CNT30619453Ipomoea trilobaSesamum indicum23.240.9794.76286forward
CNT30180581Ipomoea trilobaSecale cereale55.3930.6896.05683forward
CNT3088309Ipomoea trilobaVigna radiata14.8422.7996.17183forward
CNT30669339Ipomoea trilobaTriticum dicoccoides18.8296.6795.69232forward
CNT30309525Ipomoea trilobaCamelina sativa25.0674.8296.44309forward
CNT3082246Ipomoea trilobaBrassica juncea30.5845.3797.35377forward
CNT30605197Ipomoea trilobaGossypium raimondii16.7924.8887.92207forward
CNT30627054Ipomoea trilobaDaucus carota13.7947.0997.06170forward
CNT30688824Ipomoea trilobaTriticum urartu59.775195.39737forward
CNT30481172Ipomoea trilobaChara braunii17.8466.0783.18220forward
CNT3038142Ipomoea trilobaCucumis melo30.5854.7296.29377forward
CNT30148125Ipomoea trilobaBrachypodium distachyon6.5729.0392.5981forward

Expression of CNT30548225

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MLIKCGGYRLFKKRESLAPYSHLLISIFYRDNSCSPTP*

>peptide 2 (36 aa)
MKVNHNEKHTCPISMHITEQPAPFNISHNVFYAVES*

>peptide 3 (35 aa)
MEIEVSVRFPDFFSSSVKEGKKGVCGRKNYKRREDF

Sequence

>CNT30548225
AAAAAAGATAGCAAAAGCTACCCAACCTACTAAATCCTTTACATAAAAATAAGGGTAAGAAGCAATTTTATCCATCTCTGAATGTACACCCAATGGATTA
TTGGATCCATATTGATGCAATGCGGCCAGATGAAGAATACTGGCGCCTACTAAAATAAAGGGGAGTAAATGATGAAGACTAAAAAAACGATTTAAGGTGG
CATTGTCGACGGAGAACCCACCCCAAAGCCAAGTCACTATGGTATCTCCTACTACAGGTATGGCGCTAGCTAAGCTTGTAATTACTGTAGCTCCCCAAAA
GCTCATCTGACCCCAAGGTAGTACATATCCTATAAAAGCTGTAACTATCATTAATAGGAAGATTATAACTCCGAGACACCAAACAAATTCCCTAGGACTG
CTATAACTCGCATGATATAGACCACGAAAAATATGAAGGTGAACCACAATGAAAAACATACTTGCCCCATTAGCATGCATATAACGGAGCAACCAGCCCC
CTTCAACATCTCTCATAATGTGTTCTACGCTGTTGAAAGCTAGATCCACATGAGGTGTGTAATGCATAGCTAAAAAAACGCCAGTCACTATCTGAATGAC
TAAACAAAGACCAGCTAACGAACCGAACCCCCACCAATAACTAAGATTGCTCGGGGTTGGATAATCTATCAAATGCTGATTAAGTGTGGAGGATATAGGT
TGTTTAAGAAGAGAGAGTCGTTGGCTCCTTATAGTCACTTATTAATTTCAATTTTCTATCGTGACAACTCTTGTTCCCCCACCCCCTAGTCGTCCTCCTT
TATCAATGCGATTACCCGCCTAAAGAAGGCGCTTTCATCTCCCTGCAAGACCAATTCTGAGCAGATAGTAAAAAACTGGGAGATTCGGATAGCGTTCTGG
GGGCCTACTATGTATTAATTTTGAGTAACCTATATTCCACCTCCGAAGGATGGAGGGGGTATACAGCGAAAAAAGCGTCGAAGGGGTCGGGTAACCCTGG
GTTACTTATGAGTCGTCCGACTTCTCGGTGACCGAATCAGAGAGGGTTTTACCGCTTTCTCTTCTCTCCAGCCCTCTCGGACTGATCATCTTGCTGCAAC
AAAGCAAGCTTAGGAATTAATTGAATGGAAATTGAGGTCTCTGTCCGCTTTCCAGATTTTTTTTCCTCCTCGGTGAAAGAGGGCAAAAAAGGTGTGTGTG
GGAGAAAGAATTATAAAAGGAGAGAAGATTTCG