Detailed information on CNT30546820


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677167Ipomoea trilobaSetaria viridis74.6367.481.7153forward
CNT30517283Ipomoea trilobaJuglans regia69.7616.5184.62143forward
CNT30494159Ipomoea trilobaOlea europaea88.2966.7985.64181forward
CNT30539981Ipomoea trilobaBrassica napus62.4412.685.94128forward
CNT30436120Ipomoea trilobaAegilops tauschii46.8319.4782.2996forward
CNT30353462Ipomoea trilobaEragrostis tef46.837.1685.4296forward
CNT3022185Ipomoea trilobaPopulus trichocarpa74.6326.0684.97153forward

Expression of CNT30546820

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MSKEAENFSTSALSCSISLLLTRPLLKSFKSFPCSFWMLKVRVTEFLDLVT

Sequence

>CNT30546820
GTGTGATTTTGCCTAGTCCTTGTACTTCATTTCGGATGTTTTGAATCCGGGCATGTCAAAGGAGGCCGAGAACTTCTCAACATCGGCCTTGAGCTGCTCG
ATTTCCTTGTTGTTGACGAGACCCTTGTTGAAGTCCTTCAAGAGTTTCCCGTGCTCCTTTTGGATGCTCAAGGTGAGGGTCACAGAGTTTCTCGACCTTG
TTACC