Detailed information on CNT30546269


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-123

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528288Ipomoea trilobaEucalyptus grandis91.9861.6485.23826forward
CNT30500332Ipomoea trilobaCoffea canephora78.6290.8683.57706forward
CNT30275114Ipomoea trilobaChenopodium quinoa73.6194.4384.27661forward
CNT30379426Ipomoea trilobaManihot esculenta92.0971.4282.59827forward
CNT30635990Ipomoea trilobaCapsicum annuum89.4238.7484.18803forward
CNT3094992Ipomoea trilobaSolanum tuberosum91.4370.5383.8821forward
CNT30233220Ipomoea trilobaBrassica oleracea86.0899.7482.92773forward
CNT3061767Ipomoea trilobaArabidopsis lyrata92.8751.0782.61834forward
CNT3073349Ipomoea trilobaBrassica juncea89.6472.3983.23805forward
CNT30217431Ipomoea trilobaKalanchoe fedtschenkoi91.6560.7884.08823forward
CNT30480747Ipomoea trilobaArabidopsis halleri90.3169.9182.61811forward
CNT30359535Ipomoea trilobaLactuca sativa92.8749.3882.97834forward
CNT30154607Ipomoea trilobaPrunus persica91.4364.2482.34821forward
CNT30574249Ipomoea trilobaVitis vinifera63.2557.1485.04568forward
CNT30643414Ipomoea trilobaCannabis sativa85.1972.7283.01765forward
CNT30321313Ipomoea trilobaAsparagus officinalis85.7558.7383.77770forward
CNT30111771Ipomoea trilobaFicus carica88.0863.4882.81791forward
CNT30114615Ipomoea trilobaEutrema salsugineum91.5483.7982.97822forward

Expression of CNT30546269

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MKSGLLLDIVIGEGTTVLELLPGEDQPLLVRRDALLILNFGLDVVDGVGTLDLESNCLAG*

>peptide 2 (42 aa)
PLLIFNFSLHAMNCVGAFHLRAVFRQRSTSAGPVESPPCLEF*

>peptide 3 (52 aa)
MSLCWSGGMPSLSWIFAFTLSIVSELSTSRVMVFPVRVFTKICIPPRSLSTK*

>peptide 4 (31 aa)
MVSELSTSKVIVLPVRVLTKICIPPLNRRTK*

Sequence

>CNT30546269
TCCCCTTCTTATCTTCAATTTTAGCCTTCACGCTATGAATTGTGTCGGAGCTTTCCACCTCCGGGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCG
GTGGAATCCCCTCCTTGTCTTGAATTTTAGCCTTGACGTTATCAATTGTGTCGGAGCTTTCCACCTCCAGGGTAATAGTCTTGCCCGTGAGGGTCTTCAC
AAAGATCTGCATTCCACCCCTGAGCCTGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCAAGAGTACGGCCGTCCTCAAGCTGCTTG
CCAGCGAAGATGAGCCTCTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATCGTATCCGAGCTTTCCACCTCCAGGG
TGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCATTCCTCCACGGAGCCTGAGCACCAAGTGAAGGGTTGATTCCTTCTGAATATTGTAGTCGGC
TAGGGTTCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCT
ATGGTGTCGGAGCTTTCAACCTCCAAGGTAATCGTCTTGCCGGTTAGGGTTTTAACGAAGATCTGCATCCCTCCCCTCAATCGGAGAACCAAATGAAGAG
TGGACTCCTTCTGGATATTGTAATCGGCGAGGGTACGACCGTCCTCGAGTTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTT
ATCTTGAATTTTGGCCTTGACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTAATTGTCTTGCCGGTTAGGGTTTTCACAAAGATCTGCATCT