Detailed information on CNT30542892


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3088675Brassica napusVigna radiata20.4622.2290.3262forward
CNT30236426Brassica napusBrassica oleracea10010097.03303forward
CNT3081558Brassica napusBrassica juncea99.0137.4591.33300reverse complement

Expression of CNT30542892

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MREAGFTEQRSPPSLSSGWITAQRHSYPSWPAGSYPAEPPT

Sequence

>CNT30542892
GTCGAGCTCAGTAACGAGTGCTTGTAACCCATGTGGGGATGATAAGTTGGTAGAACACTGGCTCGGCCAACGGGTCTGATTTGATGTGGCACTGTTCTAG
GCTGCCCAACCCAAGCTGAGAGTGGTCCGTGTGTGTTGAGCGAAAGCTTGGCGCAGACGGTTCCTAAAGTGGAGGGCAATGCGTGAGGCTGGTTTCACAG
AGCAGCGATCACCTCCCTCTCTCAGTAGTGGATGGATAACGGCTCAACGCCATTCATATCCATCATGGCCTGCTGGCTCGTACCCAGCTGAACCACCAAC
TTT