Detailed information on CNT30541676


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30634223Brassica napusCapsicum annuum24.9226.0386.8476reverse complement
CNT3094411Brassica napusSolanum tuberosum25.926.5187.3479reverse complement
CNT30587521Brassica napusMusa acuminata21.3119.8893.8565forward
CNT3084328Brassica napusVigna radiata20.9821.0592.1964forward
CNT30235726Brassica napusBrassica oleracea100.3310093.79306forward
CNT30172405Brassica napusTrifolium pratense21.9729.5294.0367forward
CNT30212924Brassica napusHelianthus annuus46.5646.5683.8142forward
CNT30623435Brassica napusDaucus carota19.6721.5191.6760reverse complement
CNT30410045Brassica napusPapaver somniferum19.6720.2793.3360reverse complement
CNT3029804Brassica napusTheobroma cacao24.2624.190.5474forward
CNT3058191Brassica napusAmborella trichopoda25.5725.4189.7478forward
CNT3050536Brassica napusCucumis sativus21.3121.3193.8565forward

Expression of CNT30541676

Peptides detected in this lncRNA

>peptide 1 (41 aa)
SSSVTWACNPSGDNKMMGRWIDLIGPGLVGLIMACPFQVGS*

Sequence

>CNT30541676
GTCGAGCTCGGTAACATGGGCTTGTAATCCAAGCGGAGACAATAAGATGATGGGACGTTGGATCGATCTCATTGGGCCGGGTTTGGTTGGGCTTATTATG
GCTTGCCCATTCCAAGTTGGGAGTTGAAGCATGCGGCTTGTGCGTAGGCTTTGGTCACGTGTTTCTTAGAGTGGGGGAGACTGCGTGAGGCTGGTTTCAC
AGAGCAGCGTACACCTCCCGCTCTTGACGGTGGAAGGATAACAGGCCTTCGCCTTCTGAGCCCACAATGACCCAATAAGCCGATTCCGATTGGACCATCA
TCTTT