CANTATAdb - search

Detailed information on CNT30541476

BLAST search results

BLAST vs Swiss-Prot:
sp|A4QL07|ATPI_DRANE, E-value = 1e-150

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30726491	Brassica napus	Lupinus angustifolius	46.86	64.64	88.31	753	forward

Expression of CNT30541476

Peptides detected in this lncRNA

>peptide 1 (56 aa)
YFSFCLRLSRDTFDSLTRSCTLTNPRSNRSKPNSQPSSNNRSSRNQWIHDKFLTPK*

>peptide 2 (52 aa)
MNSRTNSKKFWPPVGMVCGLRTARAAEPNKIAITTQEVIRTCAWTWNPPICQ*

>peptide 3 (51 aa)
MTGIGTTKGTKETRTTTTNSSANIFPKSRKLSDRGFVKSSKMLMGKRIGVG*

>peptide 4 (30 aa)
MIKHSYCPLTEIRTLNYFDSRPPLFFYLFT*

Sequence

>CNT30541476
TATTTTTCCTTCTGCCTCAGGTTGTCTCGCGATACCTTCGACAGCTTGACCCGCAGCTGTACCTTGACCAACCCCAGGTCCAATAGAAGCAAGCCCAACA
GCCAACCCAGCAGCAATAACCGAAGCAGCAGAAACCAGTGGATTCATGATAAGTTCCTCACACCAAAATAAAGAAATAGTTAATGATACAATCATCCAAC
GACTTAGGACTTAATTATAATTAAGTCATCGCTAAGATTCATCCAGCCAAAATAACCAAAAACTTGATAAGAATTACTTTGATATTAGTTCCTATCCACG
GGATTTTGAAAAATGCATAATATATATATATACGACTTTTTTATGCCGTTTCTTTTTTGTGAACCATTCTTTTCTTTTAATTCTTCGTTCTTTTTTTGAT
CGTTTTTTTCAGCCAATTCACAGATAAAAAGTAAGAACTTATAATCGAATCGTTATCTAAATAGAAATTCACAAAAATAGTGGGGCAGATTATATAGATC
TTTAACTTATATATACCTAGTCAATATCAAATATGACATATACAAGTGTTTCTTACATAACGTAAACCAACTATTCGATAATTGGGCTAACCTAAATTTG
AAAAAAAAAAATAGTTAATGATGACCCTCCATGGATTCACCTATATAAGCCGCAGCTAAAGTGGCAAAAATGAGAGCTTGAATCCCGCTTGTAAATAATC
CAAGGAACATGACAGGTATAGGAACCACTAAAGGTACTAAAGAAACAAGAACAACAACTACTAATTCATCGGCTAATATATTTCCGAAAAGTCGAAAACT
CAGTGATAGGGGTTTTGTAAAATCTTCTAAGATGTTAATGGGTAAAAGAATTGGAGTTGGTTGAATGTATTTACTGAAATACCCTAATCCTTTTTTGCTA
AGACCCGCATAAAAATATGCTACTGATGTGAGTAAAGCTAAAGCAACCGTCGTATTTATATCATTCGTTGGTGCTGCTAACTCCCCTTGAGGTAACTGGA
TAATTTTCCACGGTAAAAGGGCTCCTGACCAGTTAGAAACAAAAATAAATAAAAACAGGGTTCCAATAAAGGGAACCCATGGACCGTATTCTTCTCCAAT
CTGGGTTTGACTCACATCTCGAATGAATTCAAGGACAAATTCAAAGAAGTTTTGGCCGCCAGTTGGAATGGTTTGTGGATTGCGAACCGCTAGAGCTGCG
GAACCTAATAAGATAGCAATTACAACCCAAGAAGTAATAAGGACTTGCGCATGGACTTGGAACCCCCCTATTTGCCAATAGAAATGTTGGCCTACTTCTA
CACCAGATATCTCATATAACCCTTCTTTTATTATGTATTGATGGAACATGATAAAACATTCATATTGCCCTCTGACAGAAATAAGAACTTTAAATTATTT
TGATTCAAGACCCCCCCTTTTTTTTTACTTATTTACTTGAATTTTTATTTTAGTTTTGGATACCAACTAAACGAATCACACAATATACCCAGTTTTTTAT
CTCTTTTTCTTTTGTATGATTCAGGAATAGTAACCGATTTTATAAATCGAAATACAGGGAGCCCCTCCCTCAAAAAAAATTGATTTATTTATCTTATTAT
TAATCAA