Detailed information on CNT30541214


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619448Brassica napusSesamum indicum101.6427.1590.61309reverse complement
CNT30197509Brassica napusPisum sativum101.9713.6287.74310reverse complement
CNT30633270Brassica napusCapsicum annuum101.9737.2691.94310forward
CNT30221182Brassica napusHordeum vulgare28.6211.9297.787reverse complement
CNT30586133Brassica napusMusa acuminata21.712.9995.4566reverse complement
CNT30468144Brassica napusSaccharum spontaneum28.623.0997.787reverse complement
CNT30627916Brassica napusDaucus carota102.38.6291.64311reverse complement
CNT30574574Brassica napusVitis vinifera101.979.2192.9310reverse complement
CNT3056786Brassica napusAmborella trichopoda24.349.494.5974reverse complement
CNT30120103Brassica napusCitrus clementina21.716.1995.4566forward
CNT30103415Brassica napusOryza rufipogon28.628.7697.787reverse complement

Expression of CNT30541214

Peptides detected in this lncRNA

>peptide 1 (41 aa)
LWTRGQVNHRFWAQASLYHPSHSIPSSRIVLYRIRPDRSIE*

Sequence

>CNT30541214
CCCTATGGACAAGGGGACAAGTGAATCATCGCTTTTGGGCGCAGGCATCCCTCTACCATCCATCCCATAGCATTCCATCGTCTCGTATTGTACTGTACCG
TATCAGACCAGATAGATCTATTGAGTGAGAGAAAGGTAGTGTAACTAATTAGATATTCTTCATATTCTTATTGATAGGGATCCCCATTCATTCCTAGATT
CCCGTCATTACGGATGCCCCTACCTAACTACATGGTAGTGGTCTAGGGAGCGCAATTGCTAGAGCACGGGAGAATGAAGAGTAATGATTTCAGCAAGAGC
AGCC