Detailed information on CNT30541131


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700605Brassica napusQuercus lobata23.3814.3488.8972reverse complement
CNT30727469Brassica napusCorchorus capsularis29.5529.9389.0191forward
CNT30507383Brassica napusNicotiana attenuata24.0324.2686.4974forward
CNT3076575Brassica napusBrassica juncea10098.0998.05308forward
CNT30130300Brassica napusLolium perenne21.4322.8489.3966reverse complement
CNT30714946Brassica napusMalus domestica golden28.5715.1589.7788reverse complement
CNT3050857Brassica napusCucumis sativus2525.1690.9177forward

Expression of CNT30541131

Peptides detected in this lncRNA

>peptide 1 (56 aa)
SSLVTRACNPSRDDKVMGHWADLFGPDSVTAIYWPARSKSGVECSDSSESLWFGHS*

Sequence

>CNT30541131
GTCGAGCTTGGTAACGCGGGCTTGTAATCCAAGTAGAGACGATAAGGTGATGGGACATTGGGCCGATCTCTTTGGGCCGGACTCGGTTACGGCTATCTAC
TGGCCTGCCCGTTCCAAGTCGGGAGTTGAGTGTTCGGACTCGAGCGAAAGCTTGTGGTTCGGACACTCTTAGAGCGGAGGAGACTGCGTGAGGCTGGTTT
CACAGAGCAGCGTCCACCTCCCGCTTTCGACGGTGGAAGGATTACGGGCCGGTGCCTCCCAAGCCCACTATGACCCAATAAGCCGGCTCCAATTGGACCA
TCACTTTT