Detailed information on CNT30541074


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3043300Brassica napusPrunus dulcis32.6832.5786100forward
CNT30166212Brassica napusPistacia vera21.576.487.8866reverse complement
CNT30235645Brassica napusBrassica oleracea100.98100.6592.56309forward
CNT3063020Brassica napusArabidopsis lyrata100.98100.6586.41309forward
CNT30210362Brassica napusHelianthus annuus23.8623.7886.373forward
CNT30716661Brassica napusMalus domestica golden31.3730.9786.4696forward
CNT30479862Brassica napusArabidopsis halleri100.65100.6587.34308forward
CNT30704539Brassica napusPrunus avium30.728.7787.2394reverse complement

Expression of CNT30541074

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MRQAGFTEQRLLPALCSGRITARRHSDPLWPALVRSQLNHYF

Sequence

>CNT30541074
GTCGAGCTAAGTAACGAGAGCTTGTGACCCAAGTGGGGACAATAAGATGGTGGAACACTGGTTTGGTCCACGGGTCGGGTCTGGTGTGGCAAGTTTCTGA
GCTGCCCAGTCCAAGCTGAGAGTTATCTGTCTGGTTTGAGCGAAGGCTCGAATCAGGTGGGTGCTAAAGTCGGAAGGCAATGCGTCAGGCTGGTTTCACA
GAGCAGCGACTACTTCCCGCTCTCTGCAGTGGACGGATAACGGCTCGGCGCCACTCAGATCCACTATGGCCTGCTCTGGTTCGTTCTCAGCTGAACCACT
ATTTTT