Detailed information on CNT30541034


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373911Brassica napusArabidopsis thaliana90.2692.9890.65278reverse complement
CNT30235538Brassica napusBrassica oleracea10010099.03308forward
CNT3060682Brassica napusArabidopsis lyrata100.32100.3286.73309forward
CNT30612441Brassica napusArabis alpina86.6986.6987.64267reverse complement

Expression of CNT30541034

Peptides detected in this lncRNA

>peptide 1 (62 aa)
SSSVTRACDPCGDYEVMGRWVDLIGPGSGWALFWPAHTKLGVEAWFLSEGSGVVFLRVGETA*

Sequence

>CNT30541034
GTCGAGTTCAGTAACGCGGGCTTGTGATCCATGTGGAGACTATGAAGTGATGGGACGTTGGGTCGATCTCATTGGGCCGGGTTCGGGTTGGGCTTTATTC
TGGCCTGCCCATACCAAGTTGGGAGTCGAGGCATGGTTCTTGAGCGAAGGCTCGGGAGTTGTGTTTCTTAGAGTGGGGGAGACTGCGTGAGGCTGGTTTC
ACAGAACAGCGTTTCACCTCCCTCTCTTGACGGTGGAAGGATAACGGGCCATTGCCTTCCGAGCCCACTATGACCCAATAAGCCGTTTCCGATTGAACCA
TCACTTTT