Detailed information on CNT30540936


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30236841Brassica napusBrassica oleracea100.3310098.35303forward

Expression of CNT30540936

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MEDNALGWFHRAAITSLFRQWTDHGSMSLRFTVACWLVPSWTTIF

>peptide 2 (38 aa)
SSSVTRVVTHVGTTSWLNTGSVHRWDLLWHCSGLPSPS*

>peptide 3 (45 aa)
VELSNKGCDPCGDNKLVEHWLGPQVGSVVALFWAAQSKLRVNRLC*

Sequence

>CNT30540936
GTCGAGCTCAGTAACAAGGGTTGTGACCCATGTGGGGACAACAAGTTGGTTGAACACTGGCTCGGTCCACAGGTGGGATCTGTTGTGGCACTGTTCTGGG
CTGCCCAGTCCAAGCTGAGAGTGAACCGTCTGTGTTGAGCGAAGGCTTGGCTCAGGCGGTTCCTAAAATGGAGGACAATGCGCTAGGCTGGTTTCACAGA
GCAGCGATCACCTCCCTCTTTCGGCAGTGGACGGATCACGGCTCAATGTCACTCAGGTTCACCGTGGCCTGCTGGCTCGTACCCAGCTGGACAACCATTT
TT