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Detailed information on CNT30540534


BLAST search results

BLAST vs Swiss-Prot:
sp|Q68S26|PSBA_PANGI, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30530127Brassica napusEucalyptus grandis18.8267.7192.59216forward
CNT3021612Brassica napusCitrullus lanatus8.3647.2998.9696forward
CNT30391503Brassica napusTriticum turgidum30.6670.492.61352forward
CNT30145113Brassica napusMedicago truncatula27.5396.3493.99316forward
CNT3059907Brassica napusArabidopsis lyrata19.0843.0398.63219forward
CNT3067750Brassica napusLeersia perrieri22.395.8888.67256forward
CNT30484609Brassica napusChara braunii15.3344.7881.25176forward
CNT30102095Brassica napusOryza rufipogon11.9358.5591.97137forward
CNT30117690Brassica napusOryza nivara18.2965.4290210forward
CNT3049694Brassica napusCucumis sativus9.7637.7194.64112forward

Expression of CNT30540534

Sequence

>CNT30540534
AGATGGAGCCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGGTTAATAATATCAGCC
CAAGTATTAATAACACGTCCTTGACTATCAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAAGCAGTAAACC
AAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGAATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGC
AGCTACAATGTTGTAAGTTTCTTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAA
GAACCATGCATAGCACTAAATAGGGAGCCGCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAATACAA
TCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAAC
AGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAATTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAAAAGTGTA
GAACAATTAGTTCATAAGGACCACCGTTGTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACCAATAGCTGCAGAAGTAGG
AATAATGGCACCTGAAATAATATTGTTTCCGTAAAGAAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCG
ATAATAAAAACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTACTAGTTATCCAGTTACAGA
AGCGACCCCATAGGCTTTCGCTTTCGCGTCTCTCTAAAATTGCAGTCATGGTAAAATCCTTGGTTTATTTAATCATCAGGGACTCCCAAGCACACAAATT
CTCTAAAACTATAAGTAGATAATTGAGAGCTTGTTATTGAACAGTATA