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Detailed information on CNT30540528


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9BBU3|PSBA_LOTJA, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378681Brassica napusArabidopsis thaliana55.6269.3798.8668forward
CNT30196112Brassica napusPisum sativum34.890.2893.78418forward
CNT3095573Brassica napusSolanum tuberosum7.4122.0388.7689forward
CNT3089384Brassica napusVigna radiata46.8869.3393.07563forward
CNT30555706Brassica napusOryza glaberrima56.4598.9891.89678forward
CNT30598581Brassica napusFraxinus excelsior24.6583.8585.81296forward
CNT30605440Brassica napusGossypium raimondii27.8181.6693.11334forward
CNT30360185Brassica napusLactuca sativa59.6299.8692.04716forward
CNT3058320Brassica napusAmborella trichopoda54.3793.9691.27653forward

Expression of CNT30540528

Sequence

>CNT30540528
AATTATCCATTTATAGATGGAGCCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGGT
TAATAATATCAGCCCAAGTATTAATAACACGTCCTTGACTATCAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACC
TAAAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGAATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCA
AAATAACCGTGAGCAGCTACAATGTTGTAAGTTTCTTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAAC
TAGAAGTTACCAAAGAACCATGCATAGCACTAAATAGGGAGCCGCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTC
AGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCA
GTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACAC
CAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACCAAT
AGCTGCAGAAGAATAATGGCACCTGAAATAATATTGTTTCCGTAAAGAAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAG
CAATGAATGCGATAATAAAAACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTACTAGTTAT
CCAGTTACAGAAGCGACCCCATAGGCTTTCGCTTTCGCGTCTCTCTAAAATTGCAGTCATGGTAAAATCCTTGGTTTATTTAATCATCAGGGACTCCCAA
GCACACAAATTCTCTAAAACTATAAGTAGATAATTGAGAGCTTGTTATTGAACAGTATAACATGACTTATATAGCCATGTCAACCAATGTAAAACGGCTA
A