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Detailed information on CNT30539764


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZ87|CB1B_ARATH, E-value = 3e-101

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30237238Brassica napusBrassica oleracea75.7446.1499.27412forward

Expression of CNT30539764

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLQWITSSSRFLANVSGSAERPAVSHP*

>peptide 2 (55 aa)
MGCLMDPSAWRRFSSLSHGREDFSSGFRCPRKRPCDNEENRRQAEGSIRQPMVRIR

>peptide 3 (38 aa)
TFNGSHQDHLSSPNSQNALSMNQAWVSQVVKSSVAEDL*

Sequence

>CNT30539764
ACCTTCAACGGCTCCCATCAAGATCACTTGAGTAGCCCAAATAGCCAAAATGCTCTGAGCATGAACCAAGCTTGGGTTTCCCAAGTAGTCAAGTCCTCCG
TCGCTGAAGATCTGTGAGCCAGCCTTGAACCAAACCGCCTCTCCGAACTTGACTCCATTCCTGGCCAGCAACTCCGGGAAGACGCAGCCTAGGGCTCCGA
GCATGGCCCACCTGCAGTGGATAACTTCTAGCTCACGGTTCCTTGCGAATGTCTCGGGATCGGCTGAGAGACCGGCGGTGTCCCACCCATAGTCTCCTGG
GAACTCTCCGGTAAGGTAGCTCGGTGGCTCGCTGGAGAATGGACCCAAGTACTTGACTCTCTCCGCTCCGTACCATGGGCTGCCTGATGGACCCTTCGGC
TTGGCGACGGTTTTCCTCATTGTCACACGGCCGTGAAGACTTCTCCAGCGGCTTCAGATGTCCTCGGAAGCGGCCGTGTGACAATGAGGAAAACCGTCGC
CAGGCCGAAGGGTCCATCAGGCAGCCCATGGTACGGATCAGAGA