Detailed information on CNT30539464


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7J7|CB22_ARATH, E-value = 2e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30124866Brassica napusPhyscomitrium patens32.3420.8889.08119forward
CNT30227259Brassica napusHordeum vulgare26.0934.1687.596forward
CNT30313266Brassica napusCamelina sativa5030.5692.93184forward

Expression of CNT30539464

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MARRPFLSSFTFNSAKEDCWIADVAISYPSLN*

Sequence

>CNT30539464
CATATGCCAAATATCCATTCAATGAAAAGAGCCAGTCACTAAGTACATAAACACGAACAATACATTAATGGGTTTTACAAAGTAGATAAAACGGTGAAGC
AAATCCATACGATAATTAGTTACTTTCCGGGGACAAAGTTGGTAGCGTAAGACCAGGCGTTGTTAGCCACAGGATCCGCCAAGTGATCAAACAAGTTCTC
GATGGGGCCTTTACCAGTAACAATGGCTTGAACAAAGAATCCAAACATCGAGAACATGGCAAGACGCCCGTTCTTGAGCTCCTTCACCTTCAACTCAGCG
AAGGAGGATTGCTGGATTGCTGACGTGGCCATTTCTTATCCAAGTCTTAACTAGAAGGATTGAAGAGT