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Detailed information on CNT30538639


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30510805Brassica napusSolanum lycopersicum25.9925.986.0879forward
CNT30262041Brassica napusBrassica rapa100.3310097.7305forward

Expression of CNT30538639

Peptides detected in this lncRNA

>peptide 1 (61 aa)
SSSVAWAYNPCGDNRMMGRWVDLIGPGLLGLLWPARSRLGVEACGLSEGFSHVFLKVGETA*

Sequence

>CNT30538639
GTCGAGCTCGGTAGCGTGGGCTTATAATCCATGTGGAGACAATAGGATGATGGGACGTTGGGTCGATCTCATTGGGCCGGGTTTGTTGGGCTTATTATGG
CCTGCCCGTTCCAGGTTAGGAGTTGAGGCATGCGGCTTGAGCGAAGGCTTTAGTCACGTGTTTCTTAAAGTGGGGGAGACTGCGTGAGGCTGGTTTTACA
GAGCAGCGTACACCTCCCGCTCTTGACGGTGGAAGGATAACGGGCCTTCGCCTTCCGAGCCTACTATGACCCAATAAGCTGATTCCGATTGGACCAACTT
TTTT