Detailed information on CNT30537800


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8RXN3|PPT1_ARATH, E-value = 3e-19

BLAST vs NONCODE:
NONORUT002446, E-value = 5e-51

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550185Eucalyptus grandisIpomoea triloba7.5161.2389.96259forward
CNT3020733Eucalyptus grandisCitrullus lanatus3.828.5490.84131forward
CNT3047959Eucalyptus grandisPrunus dulcis4.2127.1588.97145reverse complement
CNT30221525Eucalyptus grandisHordeum vulgare6.6127.1186.84228forward
CNT30628273Eucalyptus grandisDaucus carota6.1234.6582.46211forward
CNT30687678Eucalyptus grandisTriticum urartu6.729.3587.45231forward
CNT30104673Eucalyptus grandisOryza rufipogon6.3231.186.7218forward

Expression of CNT30537800

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MRFCSIRLHGTPPKKRVRGHPPLPLSPLTP*

>peptide 2 (37 aa)
MFVLVTVWGVRSCCSWSSYERRADGISFLARVCVVGS*

>peptide 3 (42 aa)
MRRVILLLSIEELVLRLESTATRAVWTRKREEGRIIPPYSNK*

>peptide 4 (31 aa)
MAFLPSRFTNFRFLLMFLTLTSKQVYYLYLS*

>peptide 5 (33 aa)
MDQRTEHVPTAAPAEAIVAAPAPIDFAPSNISG*

>peptide 6 (46 aa)
MSFVLLFPVTFFTEGLKFTPASLQAAVSILSNFNNCSKGFCIWKFF*

>peptide 7 (51 aa)
MCSARKSWSIRRYHESFCLHLQTVKYLKLHYAIVLLFWQLNLLIYRNPWTI*

>peptide 8 (42 aa)
MRGRELIAIEAASRPMASVGDGFLALKIYKLPLSLDVPYSNK*

>peptide 9 (42 aa)
MIRASDLTRGSSSLDKASFTTHPKGYPFNITPKDQSSNQTNR*

>peptide 10 (78 aa)
MPKVPRGGYLKKVLLIITDGLTTELCIGAYLFSRSVIRIGRKSGWLHCALYLNASDEMKTAPIQWFPCYQHRKSDRYP*

>peptide 11 (75 aa)
MIAPLTFSRPPSCGTGLSVSTEFVRTEEDKRSFSATLPLFETPYPLCFLLILFRPHPIPFFDFIIKKKEMKMAAY*

>peptide 12 (57 aa)
MAYSRSYYYPEAVTFSGNEESYPATVHRGTCTTARKYCYKGCMDEKKGGGKDNPSLL*

Sequence

>CNT30537800
CATGACTTTGGCTTTTATGGTTTCTAAGGGCTGGGTTTTGGAGCGCAATGGCCTCGAATCTGAGTAATCAATCTCGTAATGTGCTCAGCAAGAAAGTCAT
GGTCAATAAGGAGGTATCATGAATCGTTTTGTCTTCATCTTCAGACTGTTAAGTATTTGAAGCTACATTATGCGATTGTTCTCTTATTTTGGCAATTGAA
TTTGCTTATTTACAGGAATCCTTGGACAATATAACTCTCTTTTCAATTATAACCCTGATGTCATTTGTTTTACTATTCCCTGTGACTTTTTTTACGGAAG
GTCTCAAGTTCACTCCTGCATCCCTCCAAGCCGCAGTGAGTATTCTTTCAAACTTTAATAATTGCTCAAAAGGGTTCTGTATATGGAAGTTTTTCTGATA
TGCCTTTTTTCTCATCTTAACAACAGGCGCAACAGGGATTAAATGTTCAGCAGGTATTGACCAGGTCCTTCCTTGCAGCGCCTGACTTTGCCAAGAGAGT
TCATGGCAAAAACCAATCAGAATGAATCTTTGGAAAGGGATGTGGTGGATACTCAGTAAGCTTGCCATGAGGTAGTGATGCCAAAAGTGCCTCGAGGAGG
TTACCTGAAGAAGGTTCTTCTCATTATCACTGACGGTCTAACCACGGAACTATGTATTGGAGCTTACCTGTTCTCCAGGTCTGTTATTAGGATAGGACGG
AAGTCGGGGTGGCTGCACTGCGCTTTATATCTTAACGCCAGCGATGAGATGAAAACCGCTCCTATTCAGTGGTTCCCGTGCTACCAGCATCGAAAGAGTG
ACCGCTATCCCTGACCAGCTCGTGAGTAGCATCCCGCTGCTGGTCGGCACAGCGTAGCGTCAAAAGCAGGTATGATTGCCCCGCTGACCTTTTCTAGGCC
TCCTTCCTGCGGAACTGGATTGTCGGTATCGACCGAATTTGTACGAACTGAAGAAGACAAAAGATCTTTTTCTGCAACACTGCCTCTGTTTGAGACGCCC
TATCCATTGTGTTTCCTGCTGATCTTATTCAGACCCCACCCTATTCCATTTTTCGATTTTATTATAAAAAAGAAAGAAATGAAAATGGCAGCTTACTAGA
CAACGCAGAAGATTTATTCTTTCCATAGATGCCCGATTCGTTTCCGATATGCGCTTCTGTTCTATCCGACTACACGGAACTCCTCCTAAAAAGCGCGTAA
GGGGTCACCCACCCCTTCCCCTTAGCCCTCTCACCCCCTAAGGAATGAAAGGCCACATCTAACTGTGCCAAAAAAACTTGAATACGAATGAGATCAAAAA
GGCCATCATTGAGGCAAACGATGCAATTGCTTCGGTTAGAGCAAAGCCCTAAATAGCATAACCAAATAATGGTTTATCCAATGATGGATTTCTAGCCACG
GAATGGATCAAAGAACTGAACACGTTCCGACAGCTGCTCCCGCTGAAGCAATTGTAGCAGCTCCGGCACCCATTGATTTTGCACCTTCTAACATCTCGGG
TTGAGAATTATCGTCACGCTTTTTCATTCACGTCCTTCTGAAACAGCAGCCTCGTTCCTCTCCTTTGAGTCTCGTGCCTTTTCTCTTGTTGAAGAAGCCT
TTCGCTCGTCCCTTCGCACGTGAATAAAGTGAAGGGGCCCACCACACCACTCCCCCTCCCCTTTTCACGGAAGCAACCAAACTCACCATGATAAGGGCCA
GCGATCTCACCAGGGGAAGCTCCTCTCTAGACAAAGCCAGCTTCACAACACATCCTAAGGGTTATCCCTTTAACATAACACCAAAGGATCAGTCCAGTAA
TCAAACTAACAGGTAAAAAACTTCAGAATACTGAAAAACTGGGGAATAGCTCCAAAATAAAGATTCGTGAATCTCAGCTATTCAACTAGCTAGCAACAGT
GAAATACTTTAGTAGTGCAAGCTATTTATGTTTGATCCAAAAAGGAGTGAAATCAGTTTCCTCTATCTCAACTCCTTTCCCGTCTAGTCAGACCGCGTCT
CGCCGGTGCCGGCTTAGTCGGCCAAACCGTATTCGTTAAATTTCTTTTCCAATACGTGTTGAAAGCCGGGATTTTGACCGGTATTCCATGGCTTCTTTCA
TTTCAAGTCGAGAGTCTATTTCAATAAGGGGAGAGAAACCTCCATTGGATGGATTTCCCTAAAGAGTGAGAATCAGGTGAGGGGATTGGAGCACAACTGG
AGGGAGAGATTTCTTGCTCTTTATGATCTCTTATCCTTCTATTCCTCCTCTTTTCCGGTAAGGTAGTTGACTTGCTTACTTGTTAGAGTAAGGAAAATAG
ACTTTCGGAAACAAGGAGCTCAGTAGAGCAAAGGACTGAGAAATCCTTCTTCGATGAGGCGTTTAGCTGCTCGAAATGAAGAGAAGAGTCTCTCTCGCCC
TACGGGATGTAATTGACTCACTCATTTCAACTTCCGCTCATTCTTAGTCTCTTCTTCCGCTTCTCTTCATTCAATCAAATTCACTAATTCCAGAGGCGTT
TAGCTGCTCGAAGAGTAGAGTCAATTCATGCTGAGAGGGGAAAGTAATAAAGAGAATAGCTCTCTCTCTATGTTCCCTAAGAGTTCTCCTCTTTTAAATT
CCCGGTCTTGATTCGATTTCTATGCTTGTGTGAGACTTTCTTCCATTCTTCCTTTCTTCCCTTTGTTTGATCTCCTGAGGTAAGTCCGGTGGCTCCATAG
CGCTTTCATAAAAGGGATGACATAGCCGTACTAAGGCAACAAAGAAAAGGGAAAATGGTAACAGGATGTTTGTTCTCGTGACCGTGTGGGGGGTAAGAAG
TTGCTGTTCTTGGTCTTCATACGAGAGAAGAGCCGATGGAATCTCTTTCCTAGCGAGGGTATGCGTGGTAGGGAGTTAATAGCTATTGAGGCTGCTAGCC
GTCCTATGGCTTCGGTGGGTGATGGCTTTCTTGCCCTCAAGATTTACAAACTTCCGCTTTCTCTTGATGTTCCTTACTCTAACAAGTAAGCAAGTATACT
ACCTTTATTTAAGTTAAGAGAGGTCTTAAGACTTCTTAGGGTTTAGGACTAGGACTAGCCTTGTTACGAGCAATATCCGATGCCCGGGTTTAGGTAAGGA
GAAGAAATAGATAGGGTTACAACTTCTACTGCCTATAACGCAACTCCTACAGGCTGGCCAATGGCTTACAGTAGGAGTTATTATTACCCCGAGGCTGTGA
CTTTCAGTGGGAATGAGGAGAGTTATCCTGCTACTGTCCATAGAGGAACTTGTACTACGGCTAGAAAGTACTGCTACAAGGGCTGTATGGACGAGAAAAA
GGGAGGAGGGAAGGATAATCCCTCCTTACTCTAACAAGTAAGCAAGTCAACTACCTTGGGCTGGTGAAGAGTTTCTAACTAGGGACAGAGACTACTTTCA
AAATCACAGGCTGGAGGTTCCCTTTTTTCTGCAAATGGATTGGGTTT