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Detailed information on CNT30536068


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Eucalyptus grandisOryza sativa29.8540.1693.581028reverse complement
CNT30673865Eucalyptus grandisSetaria viridis28.2251.989.3972forward
CNT30524664Eucalyptus grandisSetaria italica26.666.9193.34916reverse complement
CNT30639555Eucalyptus grandisNymphaea colorata44.5789.8795.371535reverse complement
CNT30513456Eucalyptus grandisJuglans regia56.6261.4495.691950reverse complement
CNT30378667Eucalyptus grandisArabidopsis thaliana8.3625.7496.18288reverse complement
CNT30500477Eucalyptus grandisCoffea canephora51.897.9795.461784reverse complement
CNT30616920Eucalyptus grandisSesamum indicum15.2153.6388.93524forward
CNT30269781Eucalyptus grandisChenopodium quinoa55.9565.2193.881927reverse complement
CNT30730500Eucalyptus grandisCorchorus capsularis34.55100.2596.391190reverse complement
CNT30630109Eucalyptus grandisVigna unguiculata62.267.9694.022142reverse complement
CNT30196858Eucalyptus grandisPisum sativum48.5890.0991.631673reverse complement
CNT30503447Eucalyptus grandisNicotiana attenuata32.9667.8496.211135forward
CNT30711335Eucalyptus grandisGlycine max10.8395.1593.83373forward
CNT3044711Eucalyptus grandisPrunus dulcis13.94100.6397.29480forward
CNT30638683Eucalyptus grandisCapsicum annuum14.9599.8191.84515forward
CNT3090144Eucalyptus grandisSolanum tuberosum91.7280.595.383159reverse complement
CNT30193801Eucalyptus grandisSecale cereale41.06100.1492.861414reverse complement
CNT30291213Eucalyptus grandisTriticum aestivum45.4445.0592.911565reverse complement
CNT30225309Eucalyptus grandisHordeum vulgare26.3475.2789.31907reverse complement
CNT30400299Eucalyptus grandisTriticum turgidum29.8548.293.481028reverse complement
CNT30588765Eucalyptus grandisMusa acuminata17.3685.6794.98598forward
CNT30511396Eucalyptus grandisSolanum lycopersicum17.6566.4592.43608reverse complement
CNT30554009Eucalyptus grandisOryza glaberrima9.761.2893.71334reverse complement
CNT30441975Eucalyptus grandisAegilops tauschii17.8977.2993.51616reverse complement
CNT30248027Eucalyptus grandisAvena sativa27.1896.192.31936forward
CNT30668159Eucalyptus grandisTriticum dicoccoides13.7366.2591.33473reverse complement
CNT30310298Eucalyptus grandisCamelina sativa29.767.0896.191023forward
CNT3062651Eucalyptus grandisArabidopsis lyrata19.8682.2195.91684forward
CNT30460907Eucalyptus grandisSaccharum spontaneum49.2550.992.981696reverse complement
CNT30136065Eucalyptus grandisLolium perenne16.8190.1992.57579reverse complement
CNT3017045Eucalyptus grandisZea mays49.9163.7692.151719forward
CNT30606094Eucalyptus grandisGossypium raimondii11.09100.5392.93382forward
CNT30655263Eucalyptus grandisRosa chinensis48.9893.4692.591687reverse complement
CNT30206724Eucalyptus grandisHelianthus annuus42.867.9396.471474reverse complement
CNT30126841Eucalyptus grandisCorymbia citriodora10.0292.7494.2345reverse complement
CNT30713553Eucalyptus grandisMalus domestica golden17.5789.7696.03605reverse complement
CNT30627950Eucalyptus grandisDaucus carota12.499.395.08427reverse complement
CNT30688464Eucalyptus grandisTriticum urartu53.46100.0592.991841reverse complement
CNT30722943Eucalyptus grandisTriticum spelta37.5764.2893.431294reverse complement
CNT30364730Eucalyptus grandisSorghum bicolor11.569.8492.42396forward
CNT30596725Eucalyptus grandisOryza meridionalis46.0845.9993.071587reverse complement
CNT30357533Eucalyptus grandisLactuca sativa17.7760.1292.48612reverse complement
CNT30154922Eucalyptus grandisPrunus persica49.27100.4792.691697forward
CNT30411976Eucalyptus grandisPapaver somniferum43.3568.4595.451493reverse complement
CNT30646402Eucalyptus grandisCannabis sativa31.6586.1791.381090forward
CNT3056240Eucalyptus grandisAmborella trichopoda7.2687.4197.6250reverse complement
CNT30319706Eucalyptus grandisAsparagus officinalis55.0866.0196.051897reverse complement
CNT30332807Eucalyptus grandisDioscorea rotundata40.8585.1795.951407forward
CNT30148090Eucalyptus grandisBrachypodium distachyon41.4149.0993.061426forward
CNT30103033Eucalyptus grandisOryza rufipogon44.8699.6191.721545forward
CNT30576679Eucalyptus grandisOryza barthii9.763.6294.61334reverse complement
CNT30585638Eucalyptus grandisEchinochloa crusgalli18.0640.1892.93622forward
CNT30604668Eucalyptus grandisOryza punctata10.8685.1991.71374reverse complement
CNT30726606Eucalyptus grandisLupinus angustifolius8.825.794.39303forward

Expression of CNT30536068

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MFYFTPRWGFFSPFPHGTTSLWVTQEYLALQGGPC*

>peptide 2 (39 aa)
MDSAAVRKVDLFGNLRIYAYFQLPEAFRRLLRPSSSLGA*

>peptide 3 (55 aa)
MFQFTRLSLACPWIQQQFERLTYSGISGSTLIFNSLKHFVAYYALPHLWVPRYPP*

>peptide 4 (55 aa)
MFALLKPTFSLPLRPPLLSRVLPSKAKRSLTDVFLHPTASADRLASFIFGARALD*

>peptide 5 (58 aa)
MFRSSSPLLRKSKPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQVEHA*

>peptide 6 (29 aa)
MGLFCRVPQRELSRAPRYSLPTHLCRFRV*

>peptide 7 (29 aa)
MDRSPRFGSISSDNCPMKTRFRYGSGGFP*

>peptide 8 (44 aa)
MGVLFTLPSRYYFAMGHPGVFSLARWSLLIHTGFHVPHATRVRA*

>peptide 9 (44 aa)
MASLCEITPMRRKKKALRDRPSWPNPRHSKILFQTCSHFESRDR*

>peptide 10 (43 aa)
MGYFSTVAPGTRTLAQGIFSTPSYPEKAGAPCVLEPITIFRLT*

>peptide 11 (33 aa)
VIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGK*

>peptide 12 (30 aa)
MKESDASSILFFSLAQLGHPGLEPETSPVK*

>peptide 13 (45 aa)
MLLGSERKLVMLSATELSPSRVQHSTASPSSTTLVFLSHNPVFTV*

Sequence

>CNT30536068
TTGTCATTAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACTTGTGTTTTTGGTAA
ATAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCTGAAGTTATGGGGCTATTTTGCCGAGTTCCTCAGAGAGAGTTGT
CTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTATAGGTACCCTTTTGTTGAAGGTTGTTCGAGCTTTTCTTGGGAGTATGGCA
TGGGTTACTTCAGCACCGTAGCGCCTGGTACTCGAACATTGGCTCAGGGCATTTTCTCTACCCCTTCTTACCCTGAAAAAGCAGGGGCACCTTGCGTCCT
TGAACCGATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCAACTACGCC
TTTCGGCCTGATCTTAGGCCCTAACTCACCCTCCGTGGACGAACCTTGCGGAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTT
ACTCAAGCCAACATTCTCGCTTCCGCTTCGTCCACCCCTGCTCTCCCGGGTGCTTCCCTCTAAGGCGAAACGCTCCCTTACCGATGTATTTTTACATCCC
ACAGCTTCGGCAGATCGCTTAGCCTCGTTCATCTTCGGCGCAAGAGCGCTCGATTAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAA
ACCTCCTGGCTGTCTCTGCACCCCTACCTCTTTTATCACTGAGTGGTCTTTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGC
TTATCCCCTATCGTCTCACTGGTCGACCTTGACCCCTATTATTTGGAAGTCATATCTAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTCTCGCGGCCC
GCACCGAAACAGTGCTTTACCCCTAGATGTCCAGTTAACTGCTGCGCCTCAACGCATTTTGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC
CCCTAACCACAACTCATCCGTTGATTCTTCAACATCAGTTGGTTCGGACCTCCACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAG
GTTCGGGTCCATAAGCAGTGACAATTGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGC
TCATTCTTCAATAGGCACGCGGTCAGAGTCCTAGTAGTCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCT
TTTCACCCTTCCCTCACGGTACTACTTCGCTATGGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACAGGATTCCACGTGCCC
CATGCTACTCGGGTCAGAGCGTAAGCTAGTGATGCTTTCGGCTACTGAACTCTCACCATCTAGGGTGCAGCATTCCACTGCTTCGCCTAGCAGCACGACG
CTTGTATTTCTGTCCCACAACCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGCTCACCGCTACTACGGGAATCGCTTTTGCTTTCATTTCCTCTAGCT
ACTAAGATGTTTCAATTCACCAGGTTGTCTCTTGCCTGCCCATGGATTCAGCAGCAGTTCGAAAGGTTGACCTATTCGGGAATCTCCGGATCTACGCTTA
TTTTCAACTCCCTGAAGCATTTCGTCGCTTACTACGCCCTTCCTCATCTCTGGGTGCCTAGGTATCCACCGTAAGCCTTTCCTCGTTTGAACCTCGCCCT
TCACTTTAAGGCTATGCCATCATAAGGTCCTGCTAAATGGAAGGATCTTCTCAACGTCCATGAATGAGAAATCATAGATCGAACTGCCGAATCGGAAAAA
TTGGGTGCTATCATATAGCTTTGTATCGGCTAAGTTGGAGATAAGCGGACTCGAACCGCTGACATCTGCCATAGGGTAAACCACCGCCTCTCCGGCCCCC
CGGCTGATTCTACCATATACCATAGAGGCCAACGATAGACAATAACTCCCCCCCGAACACAGCTTACAACTTTCATCGTACTGTGCTCTCCAAAGAGCAA
CTCTTCTCAAAATCGCAAAGGGTGCTGAGTTGGAATCCCATTCTAACTAAGGATTCTTGTGGTTCCGGAGGATCCAGCTACAGGAGAACCAGGAACGGAG
AGCTTTCCCCCCTTTTCCGCCCGACTCTTTGGTCTTAAGAATGCTGGTTTTAAGAATGAGTGATTGCCCTTCTCCGACCCTTACTGCTCAACCTAAGAGC
GGACAGCTAATGCGTTCCACTTATTGAACAGGATTCTATGGTCGGTCCGCGACCCCTGGATGCCGAAGGCGTCCTTGGGGTGATCTCGTAGTTCCTACGG
GGTGGAGACGATGGGGTCGGTCCATGGATTTTCTTTCCTTTTGCCGCATTTCGCTCAAAGGGTTGAAGGGAGATAGTGCATCAAGCTGTTCGCAAGGGCC
AACTTGATCCTCTTCCCCAGGGATCCCAGATGAGGGAACCCTAAGAGAGCCGCCGGCTCCAACTACCGTCCATGTACGATCCATACTAGATCTGACCAAC
TGTCCATCCTACCTCCTCTACGTTCTTGACAGCCCATCTTTGTCTCAGTAGAGTCTTTCAGTGGCATGTTTCGGTCCTCTTCCCCATTACTTAGAAAAAG
TAAGCCACCGGTTCAGGTACAAGATACTATCATTACTGCCTGGACAATTAGACATCCAACCCGTAATCGCAACGACCCAATTGCAAGAGCGGAGCTCTAC
CAACTGAGCTATATCCCCCCGAGCCAAGTGGAGCATGCATGAAGGAGTCAGATGCTTCTTCTATTCTTTTCTTTTCCTTGGCGCAGCTGGGCCATCCTGG
ACTTGAACCAGAGACCTCGCCCGTGAAGTAAATCATCGCACCTACGGTCCAACCAATTGGGAGAGAATCAATAGATTCCTTTTCGGGAGCGATTCATCCT
TCCCGAACGCAGCATACAACTCTCCGTTGTACTGCGCTCTCCAAGTGTGCTTGTTCCCCCCTTCTTCCTTACCATGGCAAGTCTTTGTGAAATAACTCCG
ATGAGAAGAAAAAAGAAGGCGTTAAGAGACAGACCCTCCTGGCCCAACCCTAGACACTCTAAGATCCTTTTTCAAACCTGCTCCCATTTCGAGTCAAGAG
ATAGATAAATAGACACGTCCCATTGCACTGATCGGGGGCGTTCGTAGTGACTGAGGGGGTCGAAGACCAAGAAGTGAGTTATTTATCATCCAAGCATTCT
TCTTACGGCTAGATCCAATCTCCTGGTCCCTGCGGAAAGGAAAA