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Detailed information on CNT30535492


BLAST search results

BLAST vs Swiss-Prot:
sp|C1KEU0|METE_KALTU, E-value = 3e-53

BLAST vs NONCODE:
NONVVIT002763, E-value = 6e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3096726Eucalyptus grandisSolanum tuberosum73.3710084.39237forward
CNT30624889Eucalyptus grandisDaucus carota57.2848.6885.41185forward
CNT3024604Eucalyptus grandisPopulus trichocarpa62.5420.888.12202forward

Expression of CNT30535492

Peptides detected in this lncRNA

>peptide 1 (39 aa)
LSSSFCLPWLVISYKRPVQNGNRTSEHSLHGTFCHALSH*

>peptide 2 (36 aa)
SPLPFVYLGWSFLTKDQFRMVTGPVSIPFMGRFVML*

Sequence

>CNT30535492
CCTCTCCTCTTCCTTTTGTTTACCTTGGTTGGTCATTTCTTACAAAAGACCAGTTCAGAATGGTAACAGGACCAGTGAGCATTCCCTTCATGGGACGTTT
TGTCATGCTTTGAGCCATTGAAGACCAAAAGACTGTCATAGCCTTGGGACGGCTGACATCACCATAGATGATAGGTGGTTTAACACATCGTGACCCGTAA
GATTGTACCCACCCATTGACAGTGAAGGCAAAACCAGACAATTGCTCACCAAAGTACTCAACCATATCATTCCTCTGCATCAGCAAGATCCAGGAAAGAA
CAGCAAGGAAACTTGTAAGCCTT