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Detailed information on CNT30535436


BLAST search results

BLAST vs Swiss-Prot:
sp|Q04613|MI25_ARATH, E-value = 8e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555485Eucalyptus grandisOryza glaberrima91.6721.1491.29264reverse complement

Expression of CNT30535436

Peptides detected in this lncRNA

>peptide 1 (95 aa)
HSALSSKKILIYNEEMIVAACFIGFIIFSRKSLGNTFKVTLDGRIQAIQEESHQFPNPNEVVPPESNEEQRLLRISLRICGTVLESLPMARCAPKC

Sequence

>CNT30535436
CATAGTGCATTAAGTTCGAAGAAGATCTTAATCTATAATGAAGAAATGATAGTAGCTGCTTGTTTTATAGGCTTTATCATATTCAGTCGGAAGAGTTTAG
GTAATACTTTCAAAGTGACTCTCGACGGGAGAATCCAGGCTATTCAGGAAGAATCGCATCAATTCCCCAATCCTAACGAAGTAGTTCCTCCGGAATCCAA
TGAAGAACAACGATTACTTAGGATCAGCTTGCGAATTTGTGGCACCGTATTAGAATCATTACCAATGGCACGCTGTGCGCCTAAGTGC