Detailed information on CNT30533443


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT007659, E-value = 1e-113

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619235Eucalyptus grandisSesamum indicum68.626.6496.95164forward
CNT30592641Eucalyptus grandisMusa acuminata65.692.3389.17157forward
CNT30228064Eucalyptus grandisAnanas comosus82.0166.4494.39196reverse complement
CNT30723028Eucalyptus grandisTriticum spelta83.2658.3690.95199reverse complement
CNT30431658Eucalyptus grandisPapaver somniferum69.8710.5292.22167forward

Expression of CNT30533443

Peptides detected in this lncRNA

>peptide 1 (29 aa)
CPHPPEWTRKKGFLGATPQVPDPGVNFPV*

Sequence

>CNT30533443
GTGTCCGCACCCCCCTGAGTGGACGAGAAAGAAAGGATTTCTCGGAGCAACCCCCCAGGTTCCAGACCCAGGAGTAAACTTTCCCGTATGAGCATTCGGT
ACATGTATCAGTCCGTGAAAGAGTGAAAGGGTCACCACTACTAAGGATCTCCCCCCTAATCTTAGATAGGTCGTCTGAGGGTTCGCCGCGGTTCATTGCT
GTGCTTACACACTAGGCTACCCTTCTCCGAAAGCTCCGC