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Detailed information on CNT30533086


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226711Eucalyptus grandisHordeum vulgare12.0322.0286.57201forward
CNT30434820Eucalyptus grandisAegilops tauschii12.0354.6286.07201forward
CNT30103343Eucalyptus grandisOryza rufipogon9.4621.1888.61158forward

Expression of CNT30533086

Peptides detected in this lncRNA

>peptide 1 (51 aa)
TLFDPERNVNKFMGFIALSQCYSSQTIPYTHFFRDAFLDQAGLCTKRNMKT*

>peptide 2 (31 aa)
MVNGSMFASLVGLGAILGLTMVNRLIKERMM*

>peptide 3 (34 aa)
MKILVDFEAGNTVTTETMPSKKLGIFPKLITFTP*

>peptide 4 (29 aa)
MRIWNCLVRIALRKSNKARELTHVSFGIE*

Sequence

>CNT30533086
CTACGCTATTCGATCCCGAAAGAAATGTGAATAAGTTCATGGGCTTTATTGCTCTTTCGCAGTGCTATTCTAGCCAAACAATTCCATATACGCATTTTTT
TAGAGATGCATTCCTTGATCAGGCAGGGCTGTGTACTAAGCGGAACATGAAAACTTAGTAGGTAGTTGTACAAAACCTACTAAGCATAGCAGCTCTTGTG
GGATTTATAGTGGTTTCGACCTCATCCTAACGGACGATCCTCACAGCAAAAACAATCACAAAGGCCAGAGTCGAAGAGCACCCAACCTTTGATAAAAAAG
AATGTACATTGCGACTAGCAAAAGAGATCCCAGCCTTTGAAAGTAGGGGCTAAAGAAATCGGTTTGTGTCTAAAAAAGGAAAAGATAAGCTCTCATGAAC
TCTGGAACTGGTTGTGATTCTAAAGTAAAACAACTAATCTTATAATTAGCCTACGTGCCTTTTCCGAGCAGTTCGTTCGTACTCAAAAATCTATCCCGAG
TATTCTAGTCATAGGTTAAAGTATTCATTCTACTCGGAAAATATGTATGCCTAATGAAGTAGGTCATGTCTTTTAATTATTTTTAGACAAACATGGTTTG
ATTACTCGAAACCGTCTGGGAAAATGACTACCTGTCATCGTAGTGCTCGACCAGAACTTTCTCCTCAAAGTAGGAAATAGGCATGCTCTTCTCCACGCCC
ACCGTTTAGGATATTAGCTCGTTATAAAGATATAGTGATAGGGCGGGCTTTAAATGAAAATCCTAGTTGATTTTGAAGCCGGCAATACTGTTACCACTGA
AACGATGCCTTCTAAGAAGCTAGGAATCTTCCCTAAGTTAATCACATTCACACCTTAGTCTCACTCTCAAACAAAAGGAATGCATCTCTAAAGAAAAATG
CGTATATGGAATTGCTTGGTTAGAATAGCACTGCGAAAGAGCAATAAAGCCCGTGAACTTACTCACGTTTCTTTCGGGATCGAATAGTGTAGCGGCATCA
GGTTTTGTTGTTTACGAGAGTTCATGAGAGCTTATCCTTCCTTTCTGTGGTAGCTAGGCCTAGTAGCATGGTTAACGGTAGCATGTTTGCTAGTCTTGTA
GGACTAGGAGCTATACTAGGCTTGACCATGGTAAATCGACTTATTAAAGAAAGAATGATGTAGGTAGACTAACTAGAAGTAGTAGGAGTTCCTGTCGAAG
GGCAAATGATTCATTTAGGAAAGATCAGATGCGGATAAAAGTCTGTTTGAAAGGAGGGAAACTCGAAATTTCATAGAAGAAGAATCAGGTCAACATAAAC
ACTTTTTCGGTTAAAATAGTCTAATGAGAAAGCATCTGTTTACGTTTGTAGTTGCAATAAGTTTTTTTTCATAGAGATTTGGTTGGTCTTCAGTTGACCT
TAGTTTAGTAGAAAATTGAACAAATTTCCATGTGTTTCTTGAAAAAAGCGTGACTTAGCTCAAGCAATGCCCTTTTTCTAAGAAGGATTGTAATAATTCT
GCTTTTACACTATTTAGAATCGCTTTCTCATATTGAGAAATTCTGTCTAGCGGCATTCGATCTCAGAATCCATTGACAGCTGCATAAATGACTAGAATTT
GTTTTTCAATTGGAAGTAGTGCAAATTGTGGTTGTTTTAGTACTTCTGTCAGCCTCGCACCTCTATTGAGT