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Detailed information on CNT30532296


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701438Eucalyptus grandisQuercus lobata87.2887.9481.681283forward
CNT30624513Eucalyptus grandisDaucus carota92.5286.1382.571360forward
CNT30330418Eucalyptus grandisDioscorea rotundata57.2884.0383.61842forward
CNT30603625Eucalyptus grandisOryza punctata58.7165.8384.01863forward
CNT30111644Eucalyptus grandisFicus carica81.5684.1481.731199forward

Expression of CNT30532296

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVLPVRVFTKICIPPLKRSTKWSVDSFWML*

>peptide 2 (42 aa)
MSLCWSGGIPSLSWILAFTLSIVSELSTSRVIVLPVRVFTKIC

>peptide 3 (50 aa)
MPSLSWIFAFTLSMVSELSTSKVMVFPVRVLTKICIPPRRRRTRWRVDSF*

>peptide 4 (31 aa)
MVSELSTSKVIVFPVRVLTKICIPPLRRRTK*

>peptide 5 (30 aa)
MVLPVRVFTKICMPPLRRRTKCRVDSFWML*

Sequence

>CNT30532296
CAATCCATCAGAAGACATCATAACTTTAAAATGGCCAACCAACCTAATAGACAGAAAAACTTGACTTCATGAAAAACCCTTCGGTGACATGAAAACTCAG
AAACCACCACGGAGACGGAGGACCAAGTGCAGAGTCGACTCTTTCTGGATGTTATAGTCAGCCAGAGTCCTCCCGTCTTCGAGTTGCTTCCCCGCAAAAA
TCAGCCTCTGCTGATCTGGCGGGATGCCTTCCTTATCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCTGAACTCTCCACCTCCAAAGTGATGGTCTT
TCCGGTCAGGGTCTTGACAAAGATCTGCATCCCACCACGCAGACGAAGGACGAGATGGAGAGTTGACTCCTTTTGAATATTGTAATCAGCCAGTGTCCTG
CCATCCTCAAGTTGCTTCCCTGCAAAAATCAACCGCTGTTGGTCTGGGGGGATTCCCTCCTTGTCCTGTATCTTTGCTTTGACATTATCGATCGTGTCAG
AGCTCTCCACCTCCAAGGTGATAGTCTTGCCAGTAAGGGTCTTTACAAAAATCTGCATGCCTCCCCTAAGACGCAGAACCAAGTGAAGAGTCGATTCTTT
CTGGATGTTATAATCTGCCAGAGTCCTGCCATCTTCTAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATT
TTCGCTTTGACATTGTCGATGGTGTCAGAGCTCTCAACTTCCAAAGTGATTGTTTTCCCAGTAAGAGTCTTGACAAAGATTTGCATTCCTCCTCTCAGAC
GGAGAACCAAGTGAAGGGTGGATTCCTTTTGTATGTTGTAGTCTGCAAGCGTCCGGCCATCCTCGAGTTGCTTGCCAGCAAAGATCAACCGCTGCTGGTC
TGGGGGAATCCCTTCTTTGTCCTGGATTTTGGCCTTCACATTGTCAATGGTATCAGAACTCTCGACCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTC
ACAAAGATCTGCATCCCACCTCTCAAACGAAGCACCAAGTGGAGTGTGGATTCCTTCTGGATGTTATAATCAGCCAAAGTGCGTCCATCCTCGAGCTGCT
TCCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGAATCTTGGCTTTAACATTGTCAATTGTGTCTGAGCTTTCAACCTCAAG
TGTAATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCATGCCACCCCTAAGGCGAAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCA
GCCAAGGTGCGCCCATCCTCGAGCTGCTTGCCTGCAAAGATGAGCCTTTGCTGGTCTGGGGGAATCCCCTCCTTGTCTTGGATCTTGGCCTTTACATTGT
CGATTGTGTCTGAACTCTCAACCTCTAGGGTGATAGTCTTGCCAGTAAGAGTTTTCACGAAGATTTGCAT