Detailed information on CNT30532270


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374346Eucalyptus grandisArabidopsis thaliana38.42.3489.0191reverse complement
CNT30635976Eucalyptus grandisCapsicum annuum50.6338.9691.67120forward
CNT30655393Eucalyptus grandisRosa chinensis34.1812.293.8381forward
CNT30574572Eucalyptus grandisVitis vinifera102.533.6184.77243reverse complement
CNT3054520Eucalyptus grandisAmborella trichopoda20.2517.4593.7548forward

Expression of CNT30532270

Peptides detected in this lncRNA

>peptide 1 (41 aa)
TELTPIQCLVELRGLQSLFLFLAQANGALQLCVGVGVGMEP*

Sequence

>CNT30532270
ACAGAGCTAACCCCTATCCAGTGCTTGGTAGAGCTAAGGGGGCTTCAATCCTTATTCCTTTTCCTCGCCCAGGCTAACGGGGCCTTACAACTTTGCGTGG
GGGTTGGGGTGGGAATGGAGCCTTGAGAAGCACTGTTCAGAGGAAGATCCTTGGCCCCTCTTCATTCTCTACAGGTTCCAAACCTTTCTTCAACATAGGT
GACAAGGAGCGGGGCAGAAATGGGAGAGATCGAACAT