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Detailed information on CNT30532226


BLAST search results

BLAST vs Swiss-Prot:
sp|O23755|EF2_BETVU, E-value = 2e-76

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547527Eucalyptus grandisIpomoea triloba36.5160.9783.33264forward
CNT30512951Eucalyptus grandisJuglans regia47.343.8586.55342forward
CNT30372986Eucalyptus grandisArabidopsis thaliana46.8933.1781.71339forward
CNT30276060Eucalyptus grandisChenopodium quinoa42.7448.7485.76309forward
CNT3019597Eucalyptus grandisCitrullus lanatus25.5924.7385.41185forward
CNT30405825Eucalyptus grandisBeta vulgaris21.0266.3883.55152forward
CNT3045373Eucalyptus grandisPrunus dulcis47.343.6287.43342forward
CNT30191304Eucalyptus grandisSecale cereale47.1626.2186.22341forward
CNT30300473Eucalyptus grandisTriticum aestivum47.1635.2385.34341forward
CNT30224354Eucalyptus grandisHordeum vulgare47.1665.785.34341forward
CNT30395070Eucalyptus grandisTriticum turgidum43.2940.9283.39313forward
CNT30561656Eucalyptus grandisActinidia chinensis47.1624.3682.99341forward
CNT30510505Eucalyptus grandisSolanum lycopersicum47.1631.485.92341forward
CNT30441158Eucalyptus grandisAegilops tauschii47.1644.9385.34341forward
CNT30309793Eucalyptus grandisCamelina sativa47.343.9679.53342forward
CNT30612508Eucalyptus grandisArabis alpina47.313.4882.16342forward
CNT30605685Eucalyptus grandisGossypium raimondii43.8541.4985.8317forward
CNT30683923Eucalyptus grandisTriticum urartu43.2934.2183.07313forward
CNT30345702Eucalyptus grandisEragrostis tef44.6739.9884.83323forward
CNT30596122Eucalyptus grandisOryza meridionalis3940.7586.17282forward
CNT30359537Eucalyptus grandisLactuca sativa42.8847.0480.32310forward
CNT30153558Eucalyptus grandisPrunus persica23.9351.1886.13173forward
CNT30100260Eucalyptus grandisOryza rufipogon43.8544.1588.64317forward
CNT30575986Eucalyptus grandisOryza barthii47.1628.8787.39341forward

Expression of CNT30532226

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MASACRTTSQTSKQIPRIFSSAKAPSFDAHWKPATTESLIS

>peptide 2 (82 aa)
MPTLLVKDTVNTTKGLLWSLDLDKVDRLKQPGLGCQLRSIDNPPSSWNDLATTSVNGISMQNHITDLKANTTHILLSQSTFF*

Sequence

>CNT30532226
CTCTCTAGAAGCAAAAATACTCTGGTAGGAGAGTTAACAATATAAGTTGCGTTGGATCTTGGTACATTATGGCGCACCATTAACTCTTAAATCAGCTCCA
ACAAGCAAAACCACCTATGAGAAAATAAAAATTGCACCTCTCAAGACACCAGGACAATGTTCAAAACTCAAAACATGACGACAAGCAGAGCAATTAAACT
TGAAAGTTTGTGACTACTACTACACAAGGGACAGTATCCAAGAAAAGAGAACTAGCTCATGGAGCCACGGACACTGCTTCATCAATCCATCCTGCAATTA
CAGCTTGTCCTCGAACTCTGACAGCGGGGTCATCTGCTCCTTCAAGCCCTTCCTCTTGCGGATATCAGTAACCAGCTGAGCTGCCTTGATGTTGTACAGA
GGGGTTCCAGGCCTCTGCATCTCCTCGAACACATGCCCACGCTTCTGGTTAAGGACACTGTAAATACCACCAAGGGCCTGCTCTGGAGCTTGGATCTCGA
CAAGGTAGACAGGCTCAAGCAGCCTGGGCTTGGCTGTCAACTGCGAAGCATAGATAACCCTCCTAGCAGTTGGAATGACCTGGCCACCACCTCTGTGAAT
GGCATCAGCATGCAGAACCACATCACAGACCTCAAAGCAAATACCACGCATATTCTCCTCAGCCAAAGCACCTTCTTTTGATGCCCACTGGAAACCAGCG
ACAACAGAATCCTTGATTTCATT