Detailed information on CNT3053206


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547369Amborella trichopodaIpomoea triloba20.928.6190.6264forward
CNT30200314Amborella trichopodaPisum sativum18.324.2489.2956reverse complement
CNT30504654Amborella trichopodaNicotiana attenuata19.9320.0788.5261forward
CNT3094411Amborella trichopodaSolanum tuberosum19.9320.4788.5261reverse complement
CNT30172426Amborella trichopodaTrifolium pratense19.9320.290.1661forward
CNT30146769Amborella trichopodaMedicago truncatula20.2620.3988.7162forward
CNT30479039Amborella trichopodaArabidopsis halleri25.4925.4985.978forward

Expression of CNT3053206

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MCPFQARSRLCSSNRRFRVGSDLEWRRMREAGFTEQRLPPPLGSGRITHWCVDCPIKL*

Sequence

>CNT3053206
ACCGGGCTCGGTAGCGTGGGCTTGTAACTCAAGCGAGGGTACACAAGGTGGTTGAACTGTGATTTGGCTCTCTTGGGTGGGCTGGTTGCGCTTGATTCGA
TGTGTCCTTTCCAAGCCAGGAGTCGGCTTTGCTCCTCTAACCGAAGGTTTAGGGTGGGCTCGGACTTAGAATGGAGGAGAATGCGTGAGGCTGGTTTCAC
AGAGCAGCGATTACCTCCTCCTCTTGGCAGTGGAAGGATAACACATTGGTGCGTGGACTGCCCAATCAAACTCTAGAGCTCCATACTCATATGGACAACC
ATTTTT