Detailed information on CNT30531958


BLAST search results

BLAST vs Swiss-Prot:
sp|Q49KU5|NU6C_EUCGG, E-value = 6e-51

BLAST vs NONCODE:
NONMEST004538, E-value = 2e-59

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671235Eucalyptus grandisSetaria viridis3.0129.0290.18112forward
CNT30273023Eucalyptus grandisChenopodium quinoa3.1724.7485.59118forward
CNT3020678Eucalyptus grandisCitrullus lanatus5.9457.2590.95221forward
CNT30730237Eucalyptus grandisCorchorus capsularis8.5233.881.07317reverse complement
CNT30569543Eucalyptus grandisActinidia chinensis33.6726.1888.831253forward
CNT30146271Eucalyptus grandisMedicago truncatula5.7542.2983.64214reverse complement
CNT30716591Eucalyptus grandisMalus domestica golden4.3527.1883.95162forward
CNT3057987Eucalyptus grandisAmborella trichopoda11.7423.4386.5437forward
CNT30723989Eucalyptus grandisLupinus angustifolius11.530.789.49428forward

Expression of CNT30531958

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MMNKKRRYLFNFFSKKKRNKEKKSFCFNESHVEILITHKELMVFHN*

>peptide 2 (42 aa)
VQMEEKNLLINEFQFVDYTYQICSIIWFDFVVQIIPYQDVSK*

>peptide 3 (58 aa)
MLFLSLLILREVVNREYPSPFSFLYNERSWKEVVNNRLPREMGKRNFHPDLIIGLFLV*

>peptide 4 (49 aa)
MYFGVPNHPLIFAQSPVRVIHRNQSENSIRLIFELSPLQARMTNQPILG*

>peptide 5 (31 aa)
MNIGKKKKIFFFFVPILLLKKGGFKKRIISF*

Sequence

>CNT30531958
GAGTTCAAATGGAAGAAAAAAATCTGTTGATAAATGAATTCCAATTTGTTGACTATACCTATCAAATCTGCTCGATAATCTGGTTTGACTTTGTCGTCCA
GATAATCCCGTACCAAGACGTATCTAAATAGTAGTCATTAGTGAAACCAAAATACTTGTACAAACCAACGAAGTAATCCCATCTCCAACAGTCCAAAGAT
TCAAATCTTTGTAATATTCTGAACCATTCATGAACATCACAGCAAATAGAATTAAAACGTTTATAGCTCCTACATAAATAAGGAGCTGCGCAGCCGCTAC
AAAATGGGAGTTTGATAGAATATAAATAAGGATATACAAACAAGAACCAATCCAAGGAAAAGGCAGAATAAATTGGATTGGTAAGTAATACCACCCCTAG
ACTTCCTAATATAAGACCTGATCCCAGAAAACTAAAAGAAAATCATGTATTGGTCCAGGCAAATCCATTATTATATGTAAAGAAAAATAAATTGAAATGT
TTTTCATGATTTTATTGACTCGACAAGGAATTTTTTAGGATATGCTCCTAATTGCATTTAATTCAAATCGAATGGATTAAAAATGGGTCTAGGTCCAATT
AGTGGACCAATATAATATGGTTTTCTCTTTACCCAAAAAATGGAAAAAGGGTAATTTAGCTCAAAACTGAAATTATATTATTAGATTCAATTTTCAATCT
AACTTTAATCGTACTTTTACCAACTAATCAACAGTTAATTGGAATTTTAGTTATTGACCAACAAAAAAAAATAAAGAACTCATTCCTGTAGATAGATCAA
ATTGAACCCTACTAATTGGTGGAGATTCCTCTTTAATCAAAAATCAAAGGGTTTTCACATTTTTTTATTTTATTATTATTTGAGGCGAATTCGAAATTGT
TCGAATTGTATAATCGTTAATTACTGACATTGGTAAACGACCCAATGCGATTGATTATAATTCAATTCGTGACGATCATAAGTAGAAAGTTCATATTCTT
CAGTCATTGATAAACAATTTGTTGGACATACTCAACACAGTTACCACAAAAAATACAAATTCCGAAATCAATACTGTAATTAAGCAAGCGTTTCTTTCGT
ATACCAGTTTCCAATTTCCAATCAACAACAGGTAGATCTATAGGACATACACGAACACATACTTCACAAGCAATGCATTTATCAATTCAAAATGGATTCG
GCCGCGGAAACGCTCAGATGTAATTAATTTTTCATAAGGATATTGAATAGTTACAGGTAAACGATTTGCGTGAGATAAGGTAATCATGAACCCTTGACCA
ATGTACCTTGCAGCTCGTACTGTTTGTTGACCGTAATTCATGAACCCAGTTACCATAGGGAACATATCGTAAAGATCTATGAATAATTTATGTTGTTTCT
TTCTCTGTTGATATTGAGAGAAGTCGTAAATCGAGAATATCCTAGTCCTTTTTCTTTCCTTTACAATGAAAGGAGTTGGAAAGAAGTTGTTAATAATAGA
TTACCGAGAGAAATGGGTAAAAGAAATTTCCATCCAGATTTAATAATTGGTCTATTCTTAGTCTAGGTAAAGTCCATCTTGTTGTGATAGAAATAAACAA
GAAGAAATAAGTTTAGCTAATGTAATAAAAATACCAATTGTCGTTCCAAAGACTCTACCTACTTTATTTATTTCAAATAGCTCAGAACGAATATGTAAGG
AATAGAGATATTCCAACCCCCTAAGTAAAGAACTGTTACAAATAACGAAGAAACTATAGATTTAGATAGGAAGCAACATAAAATAACCCAAATTTGATAC
CCGAATATTCGGTTTGATAACCTGCTACTAATTCTTCCTCTGCTTCTGGTAATCGAAAGGTAATCTCTCACATTCTGCTAGGGAAGAAATTAGAAAAATG
AAAAACCCTATAGGTTGACGCCACAAATTCCATCCCCAAAACCATATTTGGACTGGGCCTCAACTATATCAACTGTACTTGAACTGTTAGATAATCATAG
TCGATGATAACATCACTGTTCCCATCGCTATTTCAGAACCGTACGTGAGATTTTCACTCATACGGCTCCTCGAGGGCCATCAATAAATCTAAGGACCGAA
TTGATATTATTTATATGATATGTTTGTAGTATAATACTATAATATCGATTGGAAATTAAATATCTATTCTATATAGATAGAGTCAAAACCTATCGGAAGG
TCCTGAATTAGACCAATGGAATTCTGTCTGCTATAATAACTAAAAAGCACTTCTGAATTGATCTCATCCTTTAATAATTTGAATTTTTCTTTGTTGAGTA
ATAACTTAATCCTTCAATAAAATACTCTTTCTAGAAATATTAATAGATATTTCAACCCATTCTTTTTGATTACGAAAAAAAAATTATACATTAGTTCCTG
AAAAATACCACGTTATCCCTATGAATATAGGAAAGAAGAAAAAGATCTTTTTTTTTTTCGTTCCTATTCTTCTTCTGAAAAAGGGGGGTTTCAAAAAAAG
GATTATTTCGTTCTGATAGTCATTTTTGAATCTGTGGATAGGAGCATACTCTGAATCGGAATTGTGGGTAGTACTACTTGATCATTTCTACTAACTTAAA
GTCCCAATTATTATTCTTTTTATCTTATGTAAAAATTATTTTTGGATAATTTACATAAAAAATCTCCATTACTAATCCTTTATGTATTTTGGTGTTCCTA
ACCATCCACTGATTTTTGCTCAATCACCCGTTAGGGTAATACATAGAAACCAGAGTGAAAACTCTATACGGTTGATCTTTGAGTTGAGCCCGCTTCAAGC
CAGGATGACTAATCAACCAATCTTGGGGTAAAAGTCTTGCTTATATTTACTTTTTTTTTCTTGTACGTAGGAAATGAGACTCCATTTTTTACTGCTAATT
TCTAAGCTGTTTTCTTTCACTCATACAACTATCTGATTAGGTCATCAAACTGAATGATGAATAAAAAAAGGAGATATCTATTCAATTTCTTTTCGAAAAA
AAAAAGGAATAAAGAAAAGAAAAGTTTCTGTTTTAACGAATCGCACGTAGAGATATTGATAACACACAAAGAGTTAATGGTATTTCATAACTAATCGATT
GAGCAGCGGCTCGTAGACCACCTAAAAAAGAATATTTATTATTGATCCATATCCTGACATAAGAAGTCCAATGGGAGCAATACTGGAAATGGCAATCCAT
AAAAAACACCGATATTGAGATCAGATAAAACAAGGTGATAACTAAAAGGAATTACTGAATAACTTAGTAAAATGGATATAACTGCTATGGATGGTCCTAT
ACTGAATAAACGAGTATCTCTCGAGATGGAAAAAGATTCTCTTTGAAAATAAGTTTGTCCCATCTGCTAAAGCTTGAAGAATTCCCAAAGGACCGGCGTA
TTCGGGACCAATACGTTGTTGTATTCCTGCGGATATTCTCTTTCTAACCACACAATTACGAGTACACCTATGTGATTCCTAATACAAGAGTCAAAATAGG
TAAAACCATCCCTATGATTCCATAGACTTCTTTTAAAGATTCCAATCTAGAAAAGAATTTAGATCTGTACTTCTGTTGTATCAATTATCATTTTAACGAT
CAACTTCTCCCATAATGATATCTATGCTACCTAGTATGTCATAATATCGGCCAATTTCATTCTTTTAACTAACTGAGGAAGAATTTGCAAATTGATAAAA
CCAGGTGGACGAATTTTCCAC