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Detailed information on CNT30530746


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3071898Eucalyptus grandisQuercus suber35.7431.983.19119forward
CNT30105029Eucalyptus grandisOryza longistaminata29.4321.2682.6598forward

Expression of CNT30530746

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLLPSDFPKHQPNRGCTSQNMPAFRFHWV*

>peptide 2 (80 aa)
CPLQSEEMKCLGAHYMPLPVNTMSNIKLQINKIKHFACLPGWRDFIGPSHQRCLLVLSKRHLQLQVGLGHQTPWRHAAPF*

Sequence

>CNT30530746
TGTCCACTGCAGAGTGAGGAAATGAAGTGCTTGGGAGCTCATTATATGCCTCTACCTGTCAATACGATGAGTAACATCAAATTGCAGATTAACAAAATAA
AGCATTTCGCCTGCCTTCCTGGTTGGAGAGACTTCATCGGTCCTTCACATCAGCGATGCCTCCTGGTGTTATCTAAAAGACATCTTCAGCTTCAGGTAGG
TTTGGGGCATCAAACACCTTGGAGACATGCTGCTCCCTTCTGACTTTCCTAAACATCAACCTAATCGTGGCTGCACGAGCCAGAACATGCCCGCCTTCAG
GTTTCATTGGGTCTGATGACACACCTCCGCCTG