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Detailed information on CNT30530604


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30129081Eucalyptus grandisCorymbia citriodora95.9873.4686.91382forward

Expression of CNT30530604

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLPSYLPPLTLSAEAIDSSSAISSGVSFTDRAP

>peptide 2 (39 aa)
SARRAQFVFNSLSCLSSALSPVRLVHIHNLLIVNVTCTK*

>peptide 3 (45 aa)
MYKMKTVTLLLHILITATQHQLKLLQRQMLKLCTSKMQQQKQTRF*

>peptide 4 (94 aa)
MSHVQNENSHSLITHTYNSHTTSTQITSAANAQTLHIKDAATEADTLLGRFPRRKGWSVGVFPCRHASIVPATLDIVRRSNRFKLGHLFRCKLH*

Sequence

>CNT30530604
GTCGGCACGGCGGGCTCAGTTCGTATTCAACTCGCTCTCGTGTTTATCGAGTGCTCTTTCCCCAGTAAGGTTAGTACACATCCATAATCTTCTCATAGTG
AATGTCACATGTACAAAATGAAAACAGTCACTCTCTTATTACACATACTTATAACAGCCACACAACATCAACTCAAATTACTTCAGCGGCAAATGCTCAA
ACTCTGCACATCAAAGATGCAGCAACAGAAGCAGACACGCTTCTAGGCAGGTTTCCAAGAAGAAAGGGGTGGAGTGTCGGAGTTTTCCCATGTAGACATG
CTTCCATCGTACCTGCCACCCTTGACATTGTCCGCAGAAGCAATCGATTCAAGCTCGGCCATCTCTTCCGGTGTAAGCTTCACTGACAGAGCTCCAAT