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Detailed information on CNT30529251


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 1e-94

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-68

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30699961Eucalyptus grandisQuercus lobata51.6343.2989.52458forward
CNT30127456Eucalyptus grandisCorymbia citriodora73.3981.9990.78651forward
CNT30349330Eucalyptus grandisEragrostis tef51.6329.5591.05458forward

Expression of CNT30529251

Peptides detected in this lncRNA

>peptide 1 (35 aa)
SNAQSIGLKNHFIQLKLRIDSQAPDDREPIGPDFT*

>peptide 2 (53 aa)
MPSLSWILAFTLSMVSELSTSRVMVLPVRVLTKICMPPLSLSTRWRVDSFWML*

>peptide 3 (87 aa)
MVSELSTSRVMVLPVRVLTKICICRAPKKITNLSLPFNHRNPEIKKTPRTRNPENPRSKIKTDTEKERNPIRRSRRTDRSEIGKPLP*

Sequence

>CNT30529251
GGAGTAATGCACAGAGTATAGGATTAAAAAACCATTTTATTCAATTGAAACTAAGGATTGATTCACAAGCCCCAGACGATCGGGAACCCATCGGCCCCGA
TTTTACATAAACACTTTCAAAGAAATTCATTCATAACAACCCTCGTCCATAGACACCAACTTTCAAGCAGACACAACCACTTAGAATCCACCACGAAGAC
GGAGCACGAGGTGAAGGGTCGACTCCTTCTGTATGTTGTAATCCGCCAGGGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTC
CGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTG
ACGAAGATCTGCATGCCTCCCCTGAGCCTCAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCT
TGCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCCACCTCGAG
GGTGATGGTCTTGCCAGTAAGGGTCTTAACGAAGATCTGCATCTGTAGAGCACCAAAAAAGATCACAAATTTAAGCCTCCCCTTCAACCATCGCAACCCA
GAAATCAAGAAAACGCCAAGAACACGAAACCCAGAGAACCCAAGATCGAAGATCAAAACGGATACGGAAAAAGAAAGAAACCCAATTCGCAGATCGCGAA
GAACGGACAGATCGGAGATCGGGAAGCCCTTACCTTGAAAGAATTCGCAAGGGGCTTGGCTGAGACTCAATCGAGAAGAAGGGAGAG