« Back to Eucalyptus grandis search


Detailed information on CNT30528991


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30354707Eucalyptus grandisLactuca sativa29.6713.6586.67135reverse complement

Expression of CNT30528991

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MMKKGLPYFRGRERGKRKWAKSPYREETLRESI*

>peptide 2 (55 aa)
DQPLSKRRVVVLLSKNGKGRRCSSLPRSRISHVVRGQTNDSLLKGLESLFLFSGM*

Sequence

>CNT30528991
CGATCAACCGCTATCTAAGAGAAGAGTTGTAGTTCTTCTATCGAAAAATGGCAAGGGGAGAAGATGTAGCAGCTTGCCTAGATCTCGGATTTCCCACGTA
GTCCGTGGTCAAACCAACGATTCTCTTCTCAAAGGTTTAGAGAGTCTTTTTCTTTTTTCCGGTATGTAGCTCCGCGAGCAAAGAGTGCATCATCGGGGCA
GGGTGAAAACGAAGATAGGATCATCATCACGGCCCTTTTTTTCTTTGTTTTTTTGTGTCCTTCTGAGACAAATTCATTTCAAATAAAGGAAGGCTGTCAT
GATGAAGAAAGGCTTGCCTTATTTCCGGGGAAGAGAAAGAGGAAAGAGAAAATGGGCCAAATCGCCTTATAGAGAAGAAACTCTTAGGGAATCGATCTAG
ACTAGATGAGATGCCGCTGCCATTCAACTAGCTGCCAGAACGAAATCAAGAGATG