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Detailed information on CNT30528977


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 6e-158

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-143

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693865Eucalyptus grandisOryza sativa67.3171.385.81902forward
CNT30641270Eucalyptus grandisNymphaea colorata66.5744.6785.87892forward
CNT30727322Eucalyptus grandisCorchorus capsularis68.7372.4684.15921forward
CNT30169912Eucalyptus grandisPistacia vera67.9957.385.62911forward
CNT3094992Eucalyptus grandisSolanum tuberosum68.6679.0485920forward
CNT30538027Eucalyptus grandisBrassica napus65.7546.4784.45881forward
CNT30553671Eucalyptus grandisOryza glaberrima66.9477.1385.73897forward
CNT30242826Eucalyptus grandisAvena sativa68.1373.0489.92913forward
CNT3077383Eucalyptus grandisBrassica juncea68.9671.384.09924forward
CNT30461176Eucalyptus grandisSaccharum spontaneum68.1326.7886.09913forward
CNT30142111Eucalyptus grandisLolium perenne68.3674.1188.32916forward
CNT30229037Eucalyptus grandisAnanas comosus67.3958.4188.82903forward
CNT30652285Eucalyptus grandisRosa chinensis68.5875.5185.09919forward
CNT30623044Eucalyptus grandisDaucus carota68.3646.4584.28916forward
CNT30684712Eucalyptus grandisTriticum urartu67.3135.2589.36902forward
CNT30704865Eucalyptus grandisPrunus avium68.4382.3286.26917forward
CNT30110940Eucalyptus grandisOryza longistaminata67.3133.2685.37902forward
CNT30321313Eucalyptus grandisAsparagus officinalis64.465.8386.44863forward
CNT30116852Eucalyptus grandisOryza nivara67.3175.9385.81902forward
CNT30114615Eucalyptus grandisEutrema salsugineum67.8492.6686.14909forward

Expression of CNT30528977

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MVSELSTSRVMVLPVRVLTKICICRAPKRDHKFKPPLQPSQPRNQENANNTKPRKPKIQDQNVYGKRRKPNSQIAKNGEIGDREALP*

>peptide 2 (36 aa)
WSNAQSIGLKNHFIQLKLRIDSQAPDDREPIGPDFT*

>peptide 3 (33 aa)
MLYRQGCGRPRAACREMSLCWSGGIPSLSWILA*

>peptide 4 (67 aa)
MPSLSWILAFTLSMVSELSTSRVMVLPVRVLTKICMPPLSLSTSGGWTPSGCCIGKGAAVLELLAAR*

>peptide 5 (40 aa)
MVSELSTSKVIVFPVRVLTKICMPPLSLSTRWRVDSFWML*

Sequence

>CNT30528977
ATGGAGTAATGCACAGAGTATAGGATTAAAAAACCATTTTATTCAATTGAAACTAAGGATTGATTCACAAGCCCCAGACGATCGGGAACCCATCGGCCCC
GATTTCACATAAACACTTTCAAAGAAATTCATTCATAACAACCCTCGTCCATAGAGACGACCAACTTTCAAGCAGACACAACCACTTAGAATCCACCACG
AAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGC
TGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGG
TCTTGACGAAGATCTGCATGCCTCCCCTGAGCCTCAGCACAAGTGGAGGGTGGACTCCTTCTGGATGTTGTATCGGCAAGGGTGCGGCCGTCCTCGAGCT
GCTTGCCGCGAGATGAGCCTCTGCTGGTCCGGGGGAATTCCTTCCTTGTCATGGATCTTGGCCTGACGTTGTCGATGGTGTCAGAGCTCTCAACCTCGAG
GGTGATGGTCTGCCGGTGAGGGTCTTGACGAAGATCTGCATACCTCCACGAAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAG
CAAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTC
GATGGTGTCAGAGCTCTCGACCTCCAAGGTGATTGTCTTCCCGGTGAGGGTCTTGACGAAGATCTGCATGCCTCCCCTGAGCCTGAGCACAAGGTGGAGG
GTCGATTCCTTCTGGATGTTGTAGTCAGCCAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGGATCCCTTCCT
TGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTCTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTG
TAGAGCACCAAAAAGAGATCACAAATTTAAGCCTCCCCTTCAACCATCGCAACCCAGAAATCAAGAAAACGCCAACAACACGAAACCCAGAAAACCCAAG
ATCCAAGATCAAAACGTATACGGAAAAAGAAGGAAACCCAATTCGCAGATCGCGAAGAACGGAGAGATCGGAGATCGGGAAGCCCTACCTTGAAAGAATT
CGCAAGGGGCTTGGCTGAGAATCAATCGAGAAGAAAGGAG