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Detailed information on CNT30528549


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 1e-94

BLAST vs NONCODE:
NONBNAT005965, E-value = 4e-70

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513516Eucalyptus grandisJuglans regia52.3458.490.63459forward

Expression of CNT30528549

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILAFTLSMVSELSTSRVMVLPVRVLTKICMPPLSLSTRWRVDSFWML*

>peptide 2 (32 aa)
QSIGLKNHFIQLKLRIDSQAPDDREPIGPDFT*

>peptide 3 (87 aa)
MVSELSTSRVMVLPVRVLTKICICRAPKRDHKFKPPLQPSQPRNQENANNTKPRKPKIQDQNVYGKRRKPNSQIAKNGEIGDREALP*

Sequence

>CNT30528549
CAGAGTATAGGATTAAAAAACCATTTTATTCAATTGAAACTAAGGATTGATTCACAAGCCCCAGACGATCGGGAACCCATCGGCCCCGATTTCACATAAA
CACTTTCAAAGAAATTCATTCATAACAACCCTCGTCCATAGAGACGACCAACTTTCAAGCAGACACAACCACTTAGAATCCACCACGAAGACGGAGCACG
AGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGGA
TGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAGGGTTATGGTCTTGCCGGTGAGGGTCTTGACGAAGAT
CTGCATGCCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCG
AAGATCAGCCTCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTCTCCACCTCGAGGGTGATGG
TCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTGTAGAGCACCAAAAAGAGATCACAAATTTAAGCCTCCCCTTCAACCATCGCAACCCAGAAATCA
AGAAAACGCCAACAACACGAAACCCAGAAAACCCAAGATCCAAGATCAAAACGTATACGGAAAAAGAAGGAAACCCAATTCGCAGATCGCGAAGAACGGA
GAGATCGGAGATCGGGAAGCCCTACCTTGAAAGAATTCGCAAGGGGCTTGGCTGAGAATCAATCGAGAAGAAAGGAG