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Detailed information on CNT30528491


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 1e-94

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-68

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30120625Eucalyptus grandisCitrus clementina52.3442.0390.2459forward

Expression of CNT30528491

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILAFTLSMVSELSTSRVIVFPVRVLTKICMPPLSLSTRWRVDSFWML*

>peptide 2 (87 aa)
MVSELSTSRVMVLPVRVLTKICICRAPKRDHKFKPPLQPSQPRNQENANNTKPRKPKIQDQNVYGKRRKPNSQIAKNGEIGDREALP*

>peptide 3 (32 aa)
QSIGLKNHFIQLKLRIDSQAPDDREPIGPDFT*

Sequence

>CNT30528491
CAGAGTATAGGATTAAAAAACCATTTTATTCAATTGAAACTAAGGATTGATTCACAAGCCCCAGACGATCGGGAACCCATCGGCCCCGATTTCACATAAA
CACTTTCAAAGAAATTCATTCATAACAACCCTCGTCCATAGAGACGACCAACTTTCAAGCAGACACAACCACTTAGAATCCACCACGAAGACGGAGCACG
AGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGGA
TGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAGGGTGATTGTCTTCCCGGTGAGGGTCTTGACGAAGAT
CTGCATGCCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCAGCCAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCG
AAGATCAGCCTCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTCTCCACCTCGAGGGTGATGG
TCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTGTAGAGCACCAAAAAGAGATCACAAATTTAAGCCTCCCCTTCAACCATCGCAACCCAGAAATCA
AGAAAACGCCAACAACACGAAACCCAGAAAACCCAAGATCCAAGATCAAAACGTATACGGAAAAAGAAGGAAACCCAATTCGCAGATCGCGAAGAACGGA
GAGATCGGAGATCGGGAAGCCCTACCTTGAAAGAATTCGCAAGGGGCTTGGCTGAGAATCAATCGAGAAGAAAGGAG