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Detailed information on CNT30527542


BLAST search results

BLAST vs Swiss-Prot:
sp|F4J339|RPP1_ARATH, E-value = 2e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
nothing found

Expression of CNT30527542

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MSSGNAERDGVWNRSSCRSDFNLPISAGSSPRQKRGTGRSAPASAPTAR*

>peptide 2 (75 aa)
MQKGMEYGIDRVVAVILIYLFLLEAPQGRNEERGVRRLRRRLPRDEARRTSTAPSEGGPPCLQWKRRFASIHNTP*

>peptide 3 (31 aa)
MRTSNFSKAERKSVFSKEPQYERSRYLSFFAI

>peptide 4 (36 aa)
MKRVGRAQLQAKEALRVFNGSVDSLQSITPPEDENL*

Sequence

>CNT30527542
TAGTTCCTTTAGATGGGCTAGGTGGGAAAGCGAAGGCAATTTGCGACTTTGACAAGTGACACCCAAATATGTTAAGCCGGAAGGAAGCTCCGGCAGCGAT
TGGAGCTTGAAGCAGTAAAGAAAATCAAGGCGTCGTAGGGAAGAAAGATTAGCTATGCTTTCTACTAGTATCCCTTTCAGATTTCTGCAATAGAAAGCAC
GTAACTCTCGGAGCTTTCTCAGACTCCCAATACCATTGGGTAATTCTTCTATACCACTGTGAGAAATATCTAGAATCTCTAGATTCTCCAAAGACCCTAT
GTCATCTGGTAATGCAGAAAGGGATGGAGTATGGAATAGATCGAGTTGTCGCAGTGATTTTAATTTACCTATTTCTGCTGGAAGCTCCCCAAGGCAGAAA
CGAGGAACGGGGCGTTCGGCGCCTGCGTCGGCGCCTACCGCGAGATGAAGCGCGTAGGACGAGCACAGCTCCAAGCGAAGGAGGCCCTCCGTGTCTTCAA
TGGAAGCGTCGATTCGCTTCAATCCATAACACCCCCTGAGGATGAGAACCTCTAACTTCTCAAAAGCTGAGAGGAAGTCAGTATTTTCCAAGGAACCACA
ATACGAAAGGTCTAGATATTTAAGCTTCTTTGCCATC